RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 OR5AC1P0C628 307 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 MED14OSP0DP75 135 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 VAMP1P23763 118 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 NUP62P37198 522 aaPredicted RBP9.49□□□□□ -0.89
COL21A1-209ENST00000482933 PAFAH1B2P68402 229 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 ODF3L2Q3SX64 289 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 LCE4AQ5TA78 99 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 PVRIGQ6DKI7 326 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 GSG1LQ6UXU4 331 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 ZNF600Q6ZNG1 722 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 KIR2DL5AQ8N109 375 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 C9orf62Q8N4C0 152 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 KIR2DL5BQ8NHK3 375 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 GALNT14Q96FL9 552 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 TMEM222Q9H0R3 208 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 NAA60Q9H7X0 242 aa9.49□□□□□ -0.89
COL21A1-209ENST00000482933 A0A0D9SG52 128 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 ATP6V1G1O75348 118 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 JTBO76095 146 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 TMEM50AO95807 157 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 RNASE2P10153 161 aaKnown RBP9.48□□□□□ -0.89
COL21A1-209ENST00000482933 SPCS3P61009 180 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 SRPXP78539 464 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 TOMM20LQ6UXN7 152 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 STPG3Q8N7X2 389 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 THAP6Q8TBB0 222 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 GLYATL2Q8WU03 294 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 RBPMSQ93062 196 aaKnown RBP9.48□□□□□ -0.89
COL21A1-209ENST00000482933 TMEM230Q96A57 120 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 ZNF414Q96IQ9 312 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.48□□□□□ -0.89
COL21A1-209ENST00000482933 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 IGHV3-49A0A0A0MS15 119 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 A0A0G2JRQ6 117 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 CRYM-AS1A6NIL9 109 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 SPRY2O43597 315 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 IFNA21P01568 189 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 OPRK1P41145 380 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 TMEM231Q9H6L2 316 aa9.48□□□□□ -0.89
COL21A1-209ENST00000482933 PUS1Q9Y606 427 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL21A1-209ENST00000482933 TENM2Q9NT68 2774 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 IGKV3-7A0A075B6H7 116 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 CLN5O75503 358 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 HTR2BP41595 481 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 TFPI2P48307 235 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 H2BFSP57053 126 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 SUPT4H1P63272 117 aaKnown RBP9.47□□□□□ -0.89
COL21A1-209ENST00000482933 OR2F1Q13607 317 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 DEFB135Q30KP9 77 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 AARDQ4LEZ3 155 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 Q6ZRM9 215 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 TCF24Q7RTU0 167 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 SELENOHQ8IZQ5 122 aaKnown RBP9.47□□□□□ -0.89
COL21A1-209ENST00000482933 INO80EQ8NBZ0 244 aaPredicted RBP9.47□□□□□ -0.89
COL21A1-209ENST00000482933 OR4X1Q8NH49 305 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 KRTAP4-9Q9BYQ8 210 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 NMES1Q9C002 83 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 VSIRQ9H7M9 311 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 CACFD1Q9UGQ2 172 aa9.47□□□□□ -0.89
COL21A1-209ENST00000482933 PLECQ15149 4684 aaKnown RBP9.47□□□□□ -0.89
COL21A1-209ENST00000482933 TRAV30A0A087WSZ9 112 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 A0A1W2PS18 150 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 DNASE2O00115 360 aaPredicted RBP9.46□□□□□ -0.9
COL21A1-209ENST00000482933 SLC25A4P12235 298 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 RPL35AP18077 110 aaKnown RBP9.46□□□□□ -0.9
COL21A1-209ENST00000482933 S100A11P31949 105 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 IFITM2Q01629 132 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 ZNF345Q14585 488 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 BSXQ3C1V8 233 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 TMEM268Q5VZI3 342 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 LRTM2Q8N967 370 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 LHFPL5Q8TAF8 219 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 GPR146Q96CH1 333 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 RNF183Q96D59 192 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
COL21A1-209ENST00000482933 TRAV2A0A0B4J234 112 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 C5orf51A6NDU8 294 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 CEBPZOSA8MTT3 80 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 G3V3Q6 166 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 SMLR1H3BR10 107 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 TSC22D2O75157 780 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 RLN2P04090 185 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 NPPCP23582 126 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 AP2S1P53680 142 aaPredicted RBP9.45□□□□□ -0.9
COL21A1-209ENST00000482933 EIF5AP63241 154 aaKnown RBP9.45□□□□□ -0.9
COL21A1-209ENST00000482933 TNFRSF9Q07011 255 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 ZNF546Q86UE3 836 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 APRG1Q8IVJ8 170 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 IL22RA2Q969J5 263 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
COL21A1-209ENST00000482933 CSTL1Q9H114 145 aa9.45□□□□□ -0.9
COL21A1-209ENST00000482933 FNDC4Q9H6D8 234 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms