RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 IL22RA2Q969J5 263 aa13.93□□□□□ -0.18
CHPF2-203ENST00000482173 DIRAS2Q96HU8 199 aa13.93□□□□□ -0.18
CHPF2-203ENST00000482173 CTDSPLO15194 276 aa13.92□□□□□ -0.18
CHPF2-203ENST00000482173 IL18Q14116 193 aa13.92□□□□□ -0.18
CHPF2-203ENST00000482173 SPCS2Q15005 226 aa13.92□□□□□ -0.18
CHPF2-203ENST00000482173 U3KQ87 197 aa13.92□□□□□ -0.18
CHPF2-203ENST00000482173 KLF9Q13886 244 aaPredicted RBP13.91□□□□□ -0.18
CHPF2-203ENST00000482173 GPR141Q7Z602 305 aa13.91□□□□□ -0.18
CHPF2-203ENST00000482173 LGI3Q8N145 548 aa13.91□□□□□ -0.18
CHPF2-203ENST00000482173 DTD1Q8TEA8 209 aa13.91□□□□□ -0.18
CHPF2-203ENST00000482173 RNF125Q96EQ8 232 aa13.91□□□□□ -0.18
CHPF2-203ENST00000482173 PBDC1Q9BVG4 233 aa13.91□□□□□ -0.18
CHPF2-203ENST00000482173 RBKSQ9H477 322 aa13.91□□□□□ -0.18
CHPF2-203ENST00000482173 HSPB7Q9UBY9 170 aa13.91□□□□□ -0.18
CHPF2-203ENST00000482173 AMBPP02760 352 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 HLA-DRB4P13762 266 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 NKX2-1P43699 371 aaPredicted RBP13.9□□□□□ -0.18
CHPF2-203ENST00000482173 CCR6P51684 374 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 SMCO1Q147U7 214 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 LYZL2Q7Z4W2 148 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 SCGB3A2Q96PL1 93 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 RABL2AQ9UBK7 228 aaPredicted RBP13.9□□□□□ -0.18
CHPF2-203ENST00000482173 PFDN2Q9UHV9 154 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 SCP2D1Q9UJQ7 156 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 RABL2BQ9UNT1 228 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 HLA-DRB4X5D2U9 266 aa13.9□□□□□ -0.18
CHPF2-203ENST00000482173 DNAH6Q9C0G6 4158 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 A0A0B4J2A0 478 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 ANKRD20A5PA0PJZ0 165 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 ZFP92A6NM28 416 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 IGKV3-20P01619 116 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 AKR1C4P17516 323 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 NUP62P37198 522 aaPredicted RBP13.89□□□□□ -0.19
CHPF2-203ENST00000482173 LINC00052Q96N35 136 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 SCRT1Q9BWW7 348 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 SHPKQ9UHJ6 478 aa13.89□□□□□ -0.19
CHPF2-203ENST00000482173 GPX4P36969 197 aaPredicted RBP13.88□□□□□ -0.19
CHPF2-203ENST00000482173 ALDH3B2P48448 385 aa13.88□□□□□ -0.19
CHPF2-203ENST00000482173 DEFB1P60022 68 aa13.88□□□□□ -0.19
CHPF2-203ENST00000482173 ZNF90Q03938 601 aa13.88□□□□□ -0.19
CHPF2-203ENST00000482173 GDF5OSQ5U4N7 250 aa13.88□□□□□ -0.19
CHPF2-203ENST00000482173 NDUFAF3Q9BU61 184 aa13.88□□□□□ -0.19
CHPF2-203ENST00000482173 MRPS26Q9BYN8 205 aaKnown RBP13.88□□□□□ -0.19
CHPF2-203ENST00000482173 MCUBQ9NWR8 336 aa13.88□□□□□ -0.19
CHPF2-203ENST00000482173 P0DMU3 169 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 FAM231AP0DMU4 169 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 FAM231CP0DMU5 169 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 EMP1P54849 157 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 ATP5IP56385 69 aaPredicted RBP13.87□□□□□ -0.19
CHPF2-203ENST00000482173 FXYD7P58549 80 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 SUPT4H1P63272 117 aaKnown RBP13.87□□□□□ -0.19
CHPF2-203ENST00000482173 GAMTQ14353 236 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 OR8G2PQ6IF36 304 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 ZNF705AQ6ZN79 300 aaPredicted RBP13.87□□□□□ -0.19
CHPF2-203ENST00000482173 LINC00336Q6ZUF6 198 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 POM121L12Q8N7R1 296 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 SLC35E1Q96K37 410 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 NEU1Q99519 415 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 WDR12Q9GZL7 423 aaKnown RBP13.87□□□□□ -0.19
CHPF2-203ENST00000482173 HECTD4Q9Y4D8 3996 aa13.87□□□□□ -0.19
CHPF2-203ENST00000482173 IGKV1D-37A0A075B6S9 117 aa13.86□□□□□ -0.19
CHPF2-203ENST00000482173 IGHV3OR16-12A0A075B7B8 117 aa13.86□□□□□ -0.19
CHPF2-203ENST00000482173 ZNF705FA8MVS1 300 aaPredicted RBP13.86□□□□□ -0.19
CHPF2-203ENST00000482173 ZNF705DP0CH99 300 aaPredicted RBP13.86□□□□□ -0.19
CHPF2-203ENST00000482173 ZNF705BP0CI00 300 aaPredicted RBP13.86□□□□□ -0.19
CHPF2-203ENST00000482173 SPART-AS1P0CW21 52 aa13.86□□□□□ -0.19
CHPF2-203ENST00000482173 ANXA3P12429 323 aa13.86□□□□□ -0.19
CHPF2-203ENST00000482173 ID1P41134 155 aa13.86□□□□□ -0.19
CHPF2-203ENST00000482173 OR1S1Q8NH92 325 aa13.86□□□□□ -0.19
CHPF2-203ENST00000482173 SAV1Q9H4B6 383 aaPredicted RBP13.86□□□□□ -0.19
CHPF2-203ENST00000482173 HERC2O95714 4834 aa13.86□□□□□ -0.19
CHPF2-203ENST00000482173 SMIM9A6NGZ8 99 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 FABP1P07148 127 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 LYZP61626 148 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 OR2F1Q13607 317 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 OR4B1Q8NGF8 309 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 COQ8AQ8NI60 647 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 DYNC2LI1Q8TCX1 351 aa13.85□□□□□ -0.19
CHPF2-203ENST00000482173 CCDC59Q9P031 241 aaKnown RBP13.85□□□□□ -0.19
CHPF2-203ENST00000482173 RSL24D1Q9UHA3 163 aaKnown RBP13.85□□□□□ -0.19
CHPF2-203ENST00000482173 TMEM189A5PLL7 270 aa13.84□□□□□ -0.19
CHPF2-203ENST00000482173 SNRPGP15A8MWD9 76 aa13.84□□□□□ -0.19
CHPF2-203ENST00000482173 PSMB3P49720 205 aa13.84□□□□□ -0.19
CHPF2-203ENST00000482173 SRPXP78539 464 aa13.84□□□□□ -0.19
CHPF2-203ENST00000482173 C1orf194Q5T5A4 169 aa13.84□□□□□ -0.19
CHPF2-203ENST00000482173 GSG1LQ6UXU4 331 aa13.84□□□□□ -0.19
CHPF2-203ENST00000482173 PPP1R14BQ96C90 147 aa13.84□□□□□ -0.19
CHPF2-203ENST00000482173 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.2
CHPF2-203ENST00000482173 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.2
CHPF2-203ENST00000482173 CLUHP3Q96NS8 147 aa13.83□□□□□ -0.2
CHPF2-203ENST00000482173 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
CHPF2-203ENST00000482173 M0R2N4 97 aa13.82□□□□□ -0.2
CHPF2-203ENST00000482173 SOCS3O14543 225 aa13.82□□□□□ -0.2
CHPF2-203ENST00000482173 RAB11AP62491 216 aa13.82□□□□□ -0.2
CHPF2-203ENST00000482173 SPATA31B1PQ5VZV4 182 aa13.82□□□□□ -0.2
CHPF2-203ENST00000482173 ZNF709Q8N972 641 aa13.82□□□□□ -0.2
CHPF2-203ENST00000482173 TRGV9Q99603 122 aa13.82□□□□□ -0.2
CHPF2-203ENST00000482173 SLC35B3Q9H1N7 401 aa13.82□□□□□ -0.2
CHPF2-203ENST00000482173 PAIP2BQ9ULR5 123 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms