RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PIMREGQ9BSJ6 248 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 WDR83OSQ9Y284 106 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 TRBV6-6A0A0A6YYG2 114 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 CGB1A6NKQ9 187 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 M0QZ24 198 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 UPK2O00526 184 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 RBFOX2O43251 390 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMPD4-218ENST00000482171 TM4SF20Q53R12 229 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 NAV2Q8IVL1 2488 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 TRAV9-2A0A087WT02 112 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 C15orf61A6NNL5 157 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 FOXI3A8MTJ6 420 aaPredicted RBP9.28□□□□□ -0.92
SMPD4-218ENST00000482171 CA7P43166 264 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 ZNF841Q6ZN19 808 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 TMEM116Q8NCL8 245 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 SSC4DQ8WTU2 575 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 DKK4Q9UBT3 224 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 HSPB7Q9UBY9 170 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 ORM1P02763 201 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 CEACAM8P31997 349 aaPredicted RBP9.27□□□□□ -0.93
SMPD4-218ENST00000482171 KLRD1Q13241 179 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 ZNF585BQ52M93 769 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 LHFPL4Q7Z7J7 247 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 THBDP07204 575 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 HBBP68871 147 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 SRSF12Q8WXF0 261 aaKnown RBP9.27□□□□□ -0.93
SMPD4-218ENST00000482171 AP5S1Q9NUS5 200 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 TRAV9-1A0A075B6T8 112 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 HIGD1CA8MV81 97 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 IL4P05112 153 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 SMIM12Q96EX1 92 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 RABAC1Q9UI14 185 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 UFC1Q9Y3C8 167 aa9.27□□□□□ -0.93
SMPD4-218ENST00000482171 TIMM23O14925 209 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 FOXH1O75593 365 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 PAX9P55771 341 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 RIPPLY3P57055 190 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 KIR3DL3Q8N743 410 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 AGMATQ9BSE5 352 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 MBNL3Q9NUK0 354 aaKnown RBP9.26□□□□□ -0.93
SMPD4-218ENST00000482171 CDH23Q9H251 3354 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 ARHGAP21Q5T5U3 1957 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 TMEM14EPQ6UXP3 125 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 LINC00305Q7Z4B0 112 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 FAM168AQ92567 244 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 TRIOO75962 3097 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 NPIPB11E5RHQ5 1161 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 LOXL3P58215 753 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 EFNB3Q15768 340 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 CDC42EP3Q9UKI2 254 aa9.26□□□□□ -0.93
SMPD4-218ENST00000482171 IGKV1-16P04430 117 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 GRNP28799 593 aaKnown RBP9.25□□□□□ -0.93
SMPD4-218ENST00000482171 Q1RN00 199 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 SPATA31B1PQ5VZV4 182 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 DPF1Q92782 380 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 GNB1LQ9BYB4 327 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 MFAP4P55083 255 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 ERVK11-1P61568 191 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 OR10AG1Q8NH19 301 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
SMPD4-218ENST00000482171 IZUMO1RA6ND01 250 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 IGLV1-44P01699 117 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 HTN1P15515 57 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 TCF24Q7RTU0 167 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 USP9YO00507 2555 aaPredicted RBP9.25□□□□□ -0.93
SMPD4-218ENST00000482171 IGHV3-66A0A0C4DH42 116 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 GPX1P07203 203 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 Q5PR19 223 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 TREML4Q6UXN2 200 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 PPP1R27Q86WC6 154 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 NUP37Q8NFH4 326 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 NAA38Q9BRA0 125 aaKnown RBP9.25□□□□□ -0.93
SMPD4-218ENST00000482171 FNDC4Q9H6D8 234 aaPredicted RBP9.25□□□□□ -0.93
SMPD4-218ENST00000482171 C7orf69Q9H7B7 122 aa9.25□□□□□ -0.93
SMPD4-218ENST00000482171 SEPSECSQ9HD40 501 aaKnown RBP9.25□□□□□ -0.93
SMPD4-218ENST00000482171 WNK1Q9H4A3 2382 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 H3BUT2 72 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 STAG3L2P0CL84 134 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 STAG3L3P0CL85 134 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 IGHV1-8P0DP01 117 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 CKS2P33552 79 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 SPRNQ5BIV9 151 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 GRAMD2BQ96HH9 432 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 LINC00527Q9UJ94 153 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 UBE2V1Q13404 147 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 MPV17L2Q567V2 206 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 SLC25A33Q9BSK2 321 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 GGTLC1Q9BX51 225 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 IGHV2-26A0A0B4J1V2 119 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 MLANAQ16655 118 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 IGFL2Q6UWQ7 119 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 C20orf144Q9BQM9 153 aa9.24□□□□□ -0.93
SMPD4-218ENST00000482171 SETD2Q9BYW2 2564 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-218ENST00000482171 HIVEP3Q5T1R4 2406 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 PEX7O00628 323 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms