RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
C9orf3-218ENST00000482056 C8orf46Q8TAG6 207 aa12.31□□□□□ -0.44
C9orf3-218ENST00000482056 ATG101Q9BSB4 218 aa12.31□□□□□ -0.44
C9orf3-218ENST00000482056 CLEC7AQ9BXN2 247 aa12.31□□□□□ -0.44
C9orf3-218ENST00000482056 CRYGBP07316 175 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 PLP1P60201 277 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 SLAQ13239 276 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 Q8NA96 180 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 RBM14Q96PK6 669 aaKnown RBP12.3□□□□□ -0.44
C9orf3-218ENST00000482056 F11RQ9Y624 299 aaKnown RBP12.3□□□□□ -0.44
C9orf3-218ENST00000482056 CFAP47Q6ZTR5 3102 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 IGHV1-3A0A0C4DH29 117 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 TCF15Q12870 199 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 C18orf32Q8TCD1 76 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 HIGD1AQ9Y241 93 aa12.3□□□□□ -0.44
C9orf3-218ENST00000482056 HIGD1CA8MV81 97 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 BUB1B-PAK6H3BSN5 160 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 TOMM40O96008 361 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 IGLV1-47P01700 117 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 RBP4P02753 201 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 KLF5Q13887 457 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-218ENST00000482056 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 TMEM190Q8WZ59 177 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 NEU1Q99519 415 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 RPP21Q9H633 154 aaKnown RBP12.29□□□□□ -0.44
C9orf3-218ENST00000482056 C7orf69Q9H7B7 122 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-218ENST00000482056 A8MWL6 223 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 OR2J3O76001 311 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 GP9P14770 177 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 CT83Q5H943 113 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 RPEQ96AT9 228 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 RNF5Q99942 180 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 ZNF492Q9P255 531 aa12.29□□□□□ -0.44
C9orf3-218ENST00000482056 ROS1P08922 2347 aa12.28□□□□□ -0.44
C9orf3-218ENST00000482056 BOD1L1Q8NFC6 3051 aa12.28□□□□□ -0.44
C9orf3-218ENST00000482056 ARFGEF3Q5TH69 2177 aa12.28□□□□□ -0.44
C9orf3-218ENST00000482056 RPLP1P05386 114 aaKnown RBP12.28□□□□□ -0.44
C9orf3-218ENST00000482056 NTF3P20783 257 aa12.28□□□□□ -0.44
C9orf3-218ENST00000482056 CNTFRP26992 372 aa12.28□□□□□ -0.44
C9orf3-218ENST00000482056 DAZAP1Q96EP5 407 aaKnown RBP12.28□□□□□ -0.44
C9orf3-218ENST00000482056 Q9H3A6 140 aa12.28□□□□□ -0.44
C9orf3-218ENST00000482056 HSBP1O75506 76 aa12.27□□□□□ -0.44
C9orf3-218ENST00000482056 P01737 135 aa12.27□□□□□ -0.44
C9orf3-218ENST00000482056 SPACA3Q8IXA5 215 aa12.27□□□□□ -0.44
C9orf3-218ENST00000482056 PRSS33Q8NF86 280 aa12.27□□□□□ -0.44
C9orf3-218ENST00000482056 SRSF8Q9BRL6 282 aaKnown RBP12.27□□□□□ -0.44
C9orf3-218ENST00000482056 OTORQ9NRC9 128 aa12.27□□□□□ -0.44
C9orf3-218ENST00000482056 ASPMQ8IZT6 3477 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 MAP1BP46821 2468 aaKnown RBP12.27□□□□□ -0.45
C9orf3-218ENST00000482056 LTAP01374 205 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 TCRAP04437 139 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 FAM87AP0C7U9 286 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 C3orf79P0CE67 100 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 APELAP0DMC3 54 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 CAMPP49913 170 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 HBBP68871 147 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 PLGLAQ15195 96 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 SPATA45Q537H7 98 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 NIT1Q86X76 327 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 Q8N976 141 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 VKORC1Q9BQB6 163 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 MLST8Q9BVC4 326 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 RNF114Q9Y508 228 aa12.27□□□□□ -0.45
C9orf3-218ENST00000482056 IGHV3-21A0A0B4J1V1 117 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 PPIAL4CA0A0B4J2A2 164 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 TEX22C9J3V5 150 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 PPIAL4GP0DN37 164 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 LYZP61626 148 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 ZNF841Q6ZN19 808 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 FAM19A2Q8N3H0 131 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 ALKBH7Q9BT30 221 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-218ENST00000482056 TMEM14CQ9P0S9 112 aa12.26□□□□□ -0.45
C9orf3-218ENST00000482056 PKDREJQ9NTG1 2253 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-218ENST00000482056 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 COX7A1P24310 79 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 MMDQ15546 238 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 ASPHD1Q5U4P2 390 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 RUSC1-AS1Q66K80 236 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 SRSF12Q8WXF0 261 aaKnown RBP12.25□□□□□ -0.45
C9orf3-218ENST00000482056 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 GFRA4Q9GZZ7 299 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 FBXL15Q9H469 300 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 RNF24Q9Y225 148 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 ZNF292O60281 2723 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 PLXNB1O43157 2135 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 M0R2Z0 102 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 GDF5OSQ5U4N7 250 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 SGK494Q96LW2 274 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 PRSS22Q9GZN4 317 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 UQCR10Q9UDW1 63 aa12.25□□□□□ -0.45
C9orf3-218ENST00000482056 PCNX1Q96RV3 2341 aa12.24□□□□□ -0.45
C9orf3-218ENST00000482056 DMXL1Q9Y485 3027 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms