RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.04□□□□□ -1.92
VPS13D-208ENST00000481484 FBXL17Q9UF56 701 aa3.04□□□□□ -1.92
VPS13D-208ENST00000481484 RABAC1Q9UI14 185 aa3.04□□□□□ -1.92
VPS13D-208ENST00000481484 SCP2D1Q9UJQ7 156 aa3.04□□□□□ -1.92
VPS13D-208ENST00000481484 HERC2O95714 4834 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 IGHV3OR16-8A0A075B7F1 116 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 IGHV3-21A0A0B4J1V1 117 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 TRAV10A0A0B4J240 114 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 A0A0B4J293 547 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 A0A0B4J2A0 478 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 TEX13DA0A0J9YY54 714 aaPredicted RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 CRYM-AS1A6NIL9 109 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 CEBPZOSA8MTT3 80 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 ZNF705EA8MWA4 302 aaPredicted RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 FAM90A26D6RGX4 464 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 RGS5O15539 181 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 ZNF207O43670 478 aaKnown RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 TMEM50AO95807 157 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 TOMM40O96008 361 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 IGKV1-17P01599 117 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 OR5AC1P0C628 307 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 IGLC1P0CG04 106 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SULT1A3P0DMM9 295 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SULT1A4P0DMN0 295 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SLC25A6P12236 298 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 OR10J1P30954 320 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 MEOX2P50222 304 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 CCR6P51684 374 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 RND2P52198 227 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 DEFB131AP59861 70 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SUPT4H1P63272 117 aaKnown RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SCGB2B2Q4G0G5 96 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 NMSQ5H8A3 153 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 S100A7AQ86SG5 101 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 TRPT1Q86TN4 253 aaKnown RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 APRG1Q8IVJ8 170 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 Q8NAQ8 132 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 OR4C16Q8NGL9 310 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 C2CD4CQ8TF44 421 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 DCANP1Q8TF63 244 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 TMEM230Q96A57 120 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SLC35E1Q96K37 410 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 FAM210BQ96KR6 192 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 CIB3Q96Q77 187 aaPredicted RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 RNF126Q9BV68 326 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 NRN1Q9NPD7 142 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 HEYLQ9NQ87 328 aaPredicted RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 CACNG5Q9UF02 275 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 RSL24D1Q9UHA3 163 aaKnown RBP3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SHPKQ9UHJ6 478 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 SLC45A2Q9UMX9 530 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 RNF24Q9Y225 148 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 KCNIP3Q9Y2W7 256 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 TMEM56-RWDD3S4R434 201 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 U3KQ87 197 aa3.03□□□□□ -1.92
VPS13D-208ENST00000481484 MUC4Q99102 2169 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 A0A1B0GU03 582 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 SMIM9A6NGZ8 99 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 MED6O75586 246 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 IL4P05112 153 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF688P0C7X2 276 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 SMIM18P0DKX4 95 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 HLA-DRB4P13762 266 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 AKR1C4P17516 323 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 NKX2-1P43699 371 aaPredicted RBP3.02□□□□□ -1.93
VPS13D-208ENST00000481484 TFPI2P48307 235 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 PSMB3P49720 205 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 TMBIM6P55061 237 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 UBE2MP61081 183 aaKnown RBP3.02□□□□□ -1.93
VPS13D-208ENST00000481484 RPP30P78346 268 aaKnown RBP3.02□□□□□ -1.93
VPS13D-208ENST00000481484 DHRS2Q13268 280 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 IL18Q14116 193 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 SMCO1Q147U7 214 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 RNASE12Q5GAN4 147 aaKnown RBP3.02□□□□□ -1.93
VPS13D-208ENST00000481484 C1orf194Q5T5A4 169 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 TMEM268Q5VZI3 342 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 PRSS54Q6PEW0 395 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 C16orf54Q6UWD8 224 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 SIGLEC15Q6ZMC9 328 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 LINC00336Q6ZUF6 198 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 CLVS1Q8IUQ0 354 aaPredicted RBP3.02□□□□□ -1.93
VPS13D-208ENST00000481484 LGI3Q8N145 548 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 GBGT1Q8N5D6 347 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 OR51G1Q8NGK1 321 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 MARCH1Q8TCQ1 289 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 DTD1Q8TEA8 209 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 Q8WTZ3 238 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 GLMPQ8WWB7 406 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 RNF125Q96EQ8 232 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 GPR82Q96P67 336 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 NEU1Q99519 415 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 FNDC4Q9H6D8 234 aaPredicted RBP3.02□□□□□ -1.93
VPS13D-208ENST00000481484 KLK11Q9UBX7 282 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 HSPB7Q9UBY9 170 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 TBC1D24Q9ULP9 559 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 HLA-DRB4X5D2U9 266 aa3.02□□□□□ -1.93
VPS13D-208ENST00000481484 NACAE9PAV3 2078 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 IGKV3-7A0A075B6H7 116 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 IGHV3OR16-13A0A075B7E8 117 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 IGHV3-49A0A0A0MS15 119 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms