RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.47■□□□□ 0.07
CCM2-214ENST00000481194 LYPD1Q8N2G4 141 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 FCER1GP30273 86 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 LINC00574Q9H8X3 128 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 PAX9P55771 341 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 NPBQ8NG41 125 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 VAMP8Q9BV40 100 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 PEF1Q9UBV8 284 aaKnown RBP15.46■□□□□ 0.07
CCM2-214ENST00000481194 ZNF253O75346 499 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 NDUFB8O95169 186 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 TRGC1P0CF51 173 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 VSIRQ9H7M9 311 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 CDC42EP3Q9UKI2 254 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 CACNA1DQ01668 2161 aa15.46■□□□□ 0.07
CCM2-214ENST00000481194 A0A1B0GW15 77 aa15.46■□□□□ 0.06
CCM2-214ENST00000481194 CD99P14209 185 aa15.46■□□□□ 0.06
CCM2-214ENST00000481194 FAM159AQ6UWV7 190 aa15.46■□□□□ 0.06
CCM2-214ENST00000481194 SDF2L1Q9HCN8 221 aa15.46■□□□□ 0.06
CCM2-214ENST00000481194 A0A1W2PRX2 142 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 PMCHP20382 165 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 PHOX2AO14813 284 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 MGPP08493 103 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 FABP4P15090 132 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 DOCK7Q96N67 2140 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 LDLRAD2Q5SZI1 272 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 SRD5A3Q9H8P0 318 aa15.45■□□□□ 0.06
CCM2-214ENST00000481194 HTN1P15515 57 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 ASCL2Q99929 193 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 ZMAT5Q9UDW3 170 aaKnown RBP15.44■□□□□ 0.06
CCM2-214ENST00000481194 PHLDA3Q9Y5J5 127 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 TTC9CQ8N5M4 171 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 C19orf84I3L1E1 186 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 GCSAMLQ5JQS6 135 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 RNF114Q9Y508 228 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 PYYP10082 97 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 IL15RAQ13261 267 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 MAPK1IP1LQ8NDC0 245 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 PCNX3Q9H6A9 2034 aa15.44■□□□□ 0.06
CCM2-214ENST00000481194 TMEM249Q2WGJ8 235 aa15.43■□□□□ 0.06
CCM2-214ENST00000481194 C9orf139Q6ZV77 190 aa15.43■□□□□ 0.06
CCM2-214ENST00000481194 KLF17Q5JT82 389 aaPredicted RBP15.43■□□□□ 0.06
CCM2-214ENST00000481194 EML6Q6ZMW3 1958 aa15.43■□□□□ 0.06
CCM2-214ENST00000481194 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
CCM2-214ENST00000481194 IL36BQ9NZH7 164 aa15.43■□□□□ 0.06
CCM2-214ENST00000481194 DIAPH2-AS1Q14236 149 aa15.43■□□□□ 0.06
CCM2-214ENST00000481194 RRN3P1Q2M238 152 aa15.43■□□□□ 0.06
CCM2-214ENST00000481194 RPP25LQ8N5L8 163 aaKnown RBP15.43■□□□□ 0.06
CCM2-214ENST00000481194 TMEM50AO95807 157 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 J3QR89 54 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 RPP21Q9H633 154 aaKnown RBP15.42■□□□□ 0.06
CCM2-214ENST00000481194 TNRC6AQ8NDV7 1962 aaKnown RBP15.42■□□□□ 0.06
CCM2-214ENST00000481194 ZNF98A6NK75 572 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 PTTG1IPP53801 180 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 C11orf71Q6IPW1 123 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 OR10D4PQ8NGN7 298 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 VPREB3Q9UKI3 123 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 ZNF318Q5VUA4 2279 aa15.42■□□□□ 0.06
CCM2-214ENST00000481194 SNRPEP62304 92 aaKnown RBP15.41■□□□□ 0.06
CCM2-214ENST00000481194 CRIP3Q6Q6R5 217 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 TOMM20LQ6UXN7 152 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 TRAV34A0A0B4J273 112 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 PGLYRP4Q96LB8 373 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 SHANK2-AS3Q9BTD1 123 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 IGHV3OR16-8A0A075B7F1 116 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 ASIPP42127 132 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 LEMD1Q68G75 181 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 AMTP48728 403 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 KMT2EQ8IZD2 1858 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 HNRNPA3P51991 378 aaKnown RBP15.41■□□□□ 0.06
CCM2-214ENST00000481194 C22orf34Q6ZV56 151 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 TCF24Q7RTU0 167 aa15.41■□□□□ 0.06
CCM2-214ENST00000481194 LOXL1Q08397 574 aaPredicted RBP15.4■□□□□ 0.06
CCM2-214ENST00000481194 PDE6HQ13956 83 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 TBX15Q96SF7 602 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 CENPVL3A0A0U1RRI6 287 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 SRRM4A7MD48 611 aaKnown RBP15.4■□□□□ 0.06
CCM2-214ENST00000481194 ZNF114Q8NC26 417 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 SCRT1Q9BWW7 348 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 CACNA1GO43497 2377 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 KCNS1Q96KK3 526 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 SNCGO76070 127 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 ELANEP08246 267 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 THAP8Q8NA92 274 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 SIRPDQ9H106 197 aa15.4■□□□□ 0.06
CCM2-214ENST00000481194 SEPSECSQ9HD40 501 aaKnown RBP15.4■□□□□ 0.06
CCM2-214ENST00000481194 DAZ1Q9NQZ3 744 aaKnown RBP15.4■□□□□ 0.06
CCM2-214ENST00000481194 WT1-ASQ06250 92 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 EXPH5Q8NEV8 1989 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 IGLV1-47P01700 117 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 DLX1P56177 255 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 TMEM183BQ1AE95 376 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 GPR61Q9BZJ8 451 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 OSTCQ9NRP0 149 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 PSG8Q9UQ74 426 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 TRAV5A0A0B4J249 113 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 M0R2Z0 102 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 HBBP68871 147 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 LY96Q9Y6Y9 160 aa15.39■□□□□ 0.05
CCM2-214ENST00000481194 C9JCJ5 164 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms