RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 FAM107AO95990 144 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 CRYGAP11844 174 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 COX6A1P12074 109 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 NDUFA5Q16718 116 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 RTL8BQ17RB0 113 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 RIC1Q4ADV7 1423 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 SDK2Q58EX2 2172 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 C22orf39Q6P5X5 142 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 LCN15Q6UWW0 184 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 CD109Q6YHK3 1445 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 ANGPTL5Q86XS5 388 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 PPTC7Q8NI37 304 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 TMEM126AQ9H061 195 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 SPANXA1Q9NS26 97 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 LTBP2Q14767 1821 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 KIF24Q5T7B8 1368 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 CACNA1AO00555 2505 aa2.72□□□□□ -1.97
COPA-203ENST00000481040 CAMSAP2Q08AD1 1489 aa2.71□□□□□ -1.97
COPA-203ENST00000481040 TRGV10A0A0A0MS01 117 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 TRDV1A0A1B0GX56 115 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 SHBGP04278 402 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 METTL15P1P0C7V9 234 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 RPL7P18124 248 aaKnown RBP2.71□□□□□ -1.98
COPA-203ENST00000481040 FUSP35637 526 aaKnown RBP eCLIP2.71□□□□□ -1.98
COPA-203ENST00000481040 DYNLT3P51808 116 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 POLR2HP52434 150 aaKnown RBP2.71□□□□□ -1.98
COPA-203ENST00000481040 KRTAP10-8P60410 259 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 RHOGP84095 191 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 PLCXD2Q0VAA5 305 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 C1orf140Q5VVS0 124 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 WFDC11Q8NEX6 87 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 OR4E2Q8NGC2 313 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 MAFIPQ8WZ33 124 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 BORCS8Q96FH0 119 aa2.71□□□□□ -1.98
COPA-203ENST00000481040 C6orf62Q9GZU0 229 aaPredicted RBP2.71□□□□□ -1.98
COPA-203ENST00000481040 EML6Q6ZMW3 1958 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 A0A1W2PNU3 283 aaPredicted RBP2.7□□□□□ -1.98
COPA-203ENST00000481040 C7orf71A4D174 169 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 ARL5CA6NH57 179 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 H7BYZ3 331 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 KPNA4O00629 521 aaPredicted RBP2.7□□□□□ -1.98
COPA-203ENST00000481040 OR10J4P0C629 311 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 LGALS3P17931 250 aaKnown RBP2.7□□□□□ -1.98
COPA-203ENST00000481040 PEBP1P30086 187 aaKnown RBP2.7□□□□□ -1.98
COPA-203ENST00000481040 AQP4P55087 323 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 HCP5Q6MZN7 132 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 AAED1Q7RTV5 226 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 DEFB128Q7Z7B8 93 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 PRR15Q8IV56 129 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 PDZD9Q8IXQ8 264 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 IFT20Q8IY31 132 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 AQP3Q92482 292 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 ISOC1Q96CN7 298 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 PRADC1Q9BSG0 188 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 LAMTOR2Q9Y2Q5 125 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 LRP5O75197 1615 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 ARHGEF10O15013 1369 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 SETBP1Q9Y6X0 1596 aa2.7□□□□□ -1.98
COPA-203ENST00000481040 ARHGEF28Q8N1W1 1705 aaKnown RBP2.69□□□□□ -1.98
COPA-203ENST00000481040 ODAMA1E959 279 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 ARRDC5A6NEK1 342 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 NDUFB3O43676 98 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 DHFRP00374 187 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 BCL2P10415 239 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 RPS3P23396 243 aaKnown RBP eCLIP2.69□□□□□ -1.981e-6■■□□□ 12.2
COPA-203ENST00000481040 SMCO1Q147U7 214 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 NNATQ16517 81 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 TAF9Q16594 264 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 Q6ZQT0 140 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 Q6ZTI0 123 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 LRRC28Q86X40 367 aaPredicted RBP2.69□□□□□ -1.98
COPA-203ENST00000481040 YIPF3Q9GZM5 350 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 POPDC3Q9HBV1 291 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 OTORQ9NRC9 128 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 UNC79Q9P2D8 2635 aa2.69□□□□□ -1.98
COPA-203ENST00000481040 MYO9BQ13459 2157 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 J3QQQ9 107 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 PGLYRP1O75594 196 aaPredicted RBP2.68□□□□□ -1.98
COPA-203ENST00000481040 CTSDP07339 412 aaPredicted RBP2.68□□□□□ -1.98
COPA-203ENST00000481040 CXCL1P09341 107 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 FKBP2P26885 142 aaKnown RBP2.68□□□□□ -1.98
COPA-203ENST00000481040 S100A11P31949 105 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 RPL26P61254 145 aaKnown RBP2.68□□□□□ -1.98
COPA-203ENST00000481040 DYNLT1P63172 113 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 KRTAP13-3Q3SY46 172 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 HRCT1Q6UXD1 115 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 SOSTDC1Q6X4U4 206 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 DHFR2Q86XF0 187 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 C3orf56Q8N813 242 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 SLC30A7Q8NEW0 376 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 OR2T10Q8NGZ9 312 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 SLC25A21Q9BQT8 299 aaPredicted RBP2.68□□□□□ -1.98
COPA-203ENST00000481040 ADAT1Q9BUB4 502 aaKnown RBP2.68□□□□□ -1.98
COPA-203ENST00000481040 NPCDR1Q9BY65 106 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 JPT1Q9UK76 154 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 RPL26L1Q9UNX3 145 aaKnown RBP2.68□□□□□ -1.98
COPA-203ENST00000481040 MED31Q9Y3C7 131 aa2.68□□□□□ -1.98
COPA-203ENST00000481040 NOTCH2Q04721 2471 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 SCN8AQ9UQD0 1980 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 NUP210Q8TEM1 1887 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms