RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 FAM24BQ8N5W8 94 aa12.53□□□□□ -0.4
HSPG2-209ENST00000480900 OR51G1Q8NGK1 321 aa12.53□□□□□ -0.4
HSPG2-209ENST00000480900 RNF125Q96EQ8 232 aa12.53□□□□□ -0.4
HSPG2-209ENST00000480900 CSTL1Q9H114 145 aa12.53□□□□□ -0.4
HSPG2-209ENST00000480900 IGKV1D-37A0A075B6S9 117 aa12.52□□□□□ -0.41
HSPG2-209ENST00000480900 WRBO00258 174 aa12.52□□□□□ -0.41
HSPG2-209ENST00000480900 IFNA21P01568 189 aa12.52□□□□□ -0.41
HSPG2-209ENST00000480900 ANXA7P20073 488 aaKnown RBP12.52□□□□□ -0.41
HSPG2-209ENST00000480900 NUP62P37198 522 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-209ENST00000480900 AP2S1P53680 142 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-209ENST00000480900 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
HSPG2-209ENST00000480900 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
HSPG2-209ENST00000480900 PAIP2BQ9ULR5 123 aaKnown RBP12.52□□□□□ -0.41
HSPG2-209ENST00000480900 STARD9Q9P2P6 4700 aa12.52□□□□□ -0.41
HSPG2-209ENST00000480900 MPTX1A8MV57 137 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 PRSS46E5RG02 174 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 PLA2G10O15496 165 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 LYRM1O43325 122 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 BUB3O43684 328 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 ID3Q02535 119 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 LEMD1Q68G75 181 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 OR8G2PQ6IF36 304 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 TRGV9Q99603 122 aa12.51□□□□□ -0.41
HSPG2-209ENST00000480900 NKX2-1P43699 371 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-209ENST00000480900 ZNF90Q03938 601 aa12.5□□□□□ -0.41
HSPG2-209ENST00000480900 THAP8Q8NA92 274 aa12.5□□□□□ -0.41
HSPG2-209ENST00000480900 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
HSPG2-209ENST00000480900 GATAD1Q8WUU5 269 aa12.5□□□□□ -0.41
HSPG2-209ENST00000480900 CCDC32Q9BV29 185 aa12.5□□□□□ -0.41
HSPG2-209ENST00000480900 C20orf85Q9H1P6 137 aa12.5□□□□□ -0.41
HSPG2-209ENST00000480900 PFDN2Q9UHV9 154 aa12.5□□□□□ -0.41
HSPG2-209ENST00000480900 STRAPQ9Y3F4 350 aaKnown RBP12.5□□□□□ -0.41
HSPG2-209ENST00000480900 DYNC2H1Q8NCM8 4307 aaKnown RBP12.5□□□□□ -0.41
HSPG2-209ENST00000480900 A0A0J9YWU9 116 aa12.49□□□□□ -0.41
HSPG2-209ENST00000480900 ZNF688P0C7X2 276 aa12.49□□□□□ -0.41
HSPG2-209ENST00000480900 SPANXN5Q5MJ07 72 aa12.49□□□□□ -0.41
HSPG2-209ENST00000480900 SIGLEC15Q6ZMC9 328 aa12.49□□□□□ -0.41
HSPG2-209ENST00000480900 STHQ8IWL8 128 aa12.49□□□□□ -0.41
HSPG2-209ENST00000480900 MITD1Q8WV92 249 aa12.49□□□□□ -0.41
HSPG2-209ENST00000480900 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
HSPG2-209ENST00000480900 RYR3Q15413 4870 aa12.48□□□□□ -0.41
HSPG2-209ENST00000480900 IGKV1OR2-108A0A075B7D4 117 aa12.48□□□□□ -0.41
HSPG2-209ENST00000480900 LCE6AA0A183 80 aa12.48□□□□□ -0.41
HSPG2-209ENST00000480900 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
HSPG2-209ENST00000480900 ATF4P18848 351 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-209ENST00000480900 POLR2GP62487 172 aaKnown RBP eCLIP12.48□□□□□ -0.41
HSPG2-209ENST00000480900 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
HSPG2-209ENST00000480900 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
HSPG2-209ENST00000480900 H3BP45 60 aa12.47□□□□□ -0.41
HSPG2-209ENST00000480900 CFDP00746 253 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-209ENST00000480900 CA1P00915 261 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-209ENST00000480900 TCRBP04435 133 aa12.47□□□□□ -0.41
HSPG2-209ENST00000480900 LYZP61626 148 aa12.47□□□□□ -0.41
HSPG2-209ENST00000480900 TRPT1Q86TN4 253 aaKnown RBP12.47□□□□□ -0.41
HSPG2-209ENST00000480900 SSSCA1O60232 199 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.41
HSPG2-209ENST00000480900 OR2F1Q13607 317 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 IAH1Q2TAA2 248 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-209ENST00000480900 C1orf194Q5T5A4 169 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 ACOT7LQ6ZUV0 252 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 S100ZQ8WXG8 99 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 SMIM8Q96KF7 97 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 PSENENQ9NZ42 101 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 FBXL17Q9UF56 701 aa12.46□□□□□ -0.41
HSPG2-209ENST00000480900 SPP1P10451 314 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 AKR1C1Q04828 323 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 TMEM41BQ5BJD5 291 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 MORN3Q6PF18 240 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-209ENST00000480900 TMEM217Q8N7C4 229 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 ZBTB8BQ8NAP8 495 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-209ENST00000480900 RAB40CQ96S21 281 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 RARRES2Q99969 163 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 NUDT15Q9NV35 164 aa12.45□□□□□ -0.42
HSPG2-209ENST00000480900 TRAV6A0A075B6T7 132 aa12.44□□□□□ -0.42
HSPG2-209ENST00000480900 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
HSPG2-209ENST00000480900 TAS2R30P59541 319 aa12.44□□□□□ -0.42
HSPG2-209ENST00000480900 EWSR1Q01844 656 aaKnown RBP eCLIP12.44□□□□□ -0.42
HSPG2-209ENST00000480900 ACTL10Q5JWF8 245 aa12.44□□□□□ -0.42
HSPG2-209ENST00000480900 TMEM144Q7Z5S9 345 aa12.44□□□□□ -0.42
HSPG2-209ENST00000480900 OR11H2Q8NH07 326 aa12.44□□□□□ -0.42
HSPG2-209ENST00000480900 SLC45A2Q9UMX9 530 aa12.44□□□□□ -0.42
HSPG2-209ENST00000480900 PMS2P5A8MQ11 134 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 SCGB1D2O95969 90 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 PAX9P55771 341 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 BPIFCQ8NFQ6 507 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-209ENST00000480900 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 GSKIPQ9P0R6 139 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
HSPG2-209ENST00000480900 LYSTQ99698 3801 aa12.43□□□□□ -0.42
HSPG2-209ENST00000480900 CXorf65A6NEN9 183 aa12.42□□□□□ -0.42
HSPG2-209ENST00000480900 A6NHS1 94 aa12.42□□□□□ -0.42
HSPG2-209ENST00000480900 FNDC10F2Z333 226 aa12.42□□□□□ -0.42
HSPG2-209ENST00000480900 TSC22D2O75157 780 aa12.42□□□□□ -0.42
HSPG2-209ENST00000480900 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-209ENST00000480900 DLK1P80370 383 aa12.42□□□□□ -0.42
HSPG2-209ENST00000480900 MZT2BQ6NZ67 158 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms