RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SP9P0CG40 484 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 KIR2DL5AQ8N109 375 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 NTN3O00634 580 aaPredicted RBP5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 FHL1Q13642 323 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 IL17RELQ6ZVW7 336 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 PTPRFP10586 1907 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 A0A1W2PRD5 423 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 A0A1W2PRF3 423 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 A0A1W2PRM7 423 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 KLRB1Q12918 225 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 SLAQ13239 276 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 C3orf36Q3SXR2 165 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 LENEPQ9Y5L5 61 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 TRBV7-9A0A0J9YWB2 115 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 CRXO43186 299 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 SLC25A20O43772 301 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 STPG1Q5TH74 334 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF562Q6V9R5 426 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 LINC00311Q8N616 119 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 OR10W1Q8NGF6 305 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF837Q96EG3 531 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 SEPSECSQ9HD40 501 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 DIDO1Q9BTC0 2240 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 LGALS1P09382 135 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 RNASE6Q93091 150 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 LIME1Q9H400 295 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 IGHV1-2P23083 117 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 NUP35Q8NFH5 326 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 FAM208BQ5VWN6 2430 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 SCN3AQ9NY46 2000 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 TDGF1P13385 188 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 GATA4P43694 442 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 OR13C6PQ8NH95 151 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 CST9LQ9H4G1 147 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 VSIRQ9H7M9 311 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 TMEM14CQ9P0S9 112 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 FREM3P0C091 2139 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 DOCK10Q96BY6 2186 aa5.06□□□□□ -1.6
PRPF4B-205ENST00000480058 C22orf46C9J442 243 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 PYYP10082 97 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 RNASE2P10153 161 aaKnown RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 TFPI2P48307 235 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 KIR3DS1Q14943 382 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 LY6G5BQ8NDX9 201 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 PIMREGQ9BSJ6 248 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 FNDC4Q9H6D8 234 aaPredicted RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 WNK1Q9H4A3 2382 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 C9JQL5 133 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 NKX2-8O15522 239 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 CTSBP07858 339 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 Q6P435 159 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 RASL10AQ92737 203 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 NPFFR1Q9GZQ6 430 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 PEMTQ9UBM1 199 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 FER1L6Q2WGJ9 1857 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 SHANK2-AS3Q9BTD1 123 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 POLR3KQ9Y2Y1 108 aaPredicted RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 MED12Q93074 2177 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 TRAV8-4A0A0B4J246 113 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 MYMXA0A1B0GTQ4 84 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 EREGO14944 169 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 PSPNO60542 156 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 TIAF1O95411 115 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 IGHG3P01860 377 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 CD55P08174 381 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 COX8AP10176 69 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 PSG1P11464 419 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 FOXC1Q12948 553 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 TPTE2P1Q5T6R2 138 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 FAM104BQ5XKR9 115 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 AMN1Q8IY45 258 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 ZCCHC24Q8N2G6 241 aaKnown RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF418Q8TF45 676 aaPredicted RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 USMG5Q96IX5 58 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 ARFGEF3Q5TH69 2177 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 M0R1W7 72 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 RIPPLY3P57055 190 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 CSRP2Q16527 193 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 PSG3Q16557 428 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 FAM74A4Q5TZK3 123 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 Q6ZSR3 168 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 GGNQ86UU5 652 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 OR11H6Q8NGC7 330 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 ST6GALNAC6Q969X2 333 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 IGKV1-27A0A075B6S5 117 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 IGHV2-26A0A0B4J1V2 119 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 C9orf118A6NHY6 69 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 PATE3B3GLJ2 98 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 E9PLN8 166 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 H3BTX0 84 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 GATA2P23769 480 aaPredicted RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 VDAC2P45880 294 aaPredicted RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 Q6ZRM9 215 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 Q86TA4 180 aa5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 BEX4Q9NWD9 120 aaPredicted RBP5.05□□□□□ -1.6
PRPF4B-205ENST00000480058 NTF4P34130 210 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 MNX1P50219 401 aaPredicted RBP5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 PMVKQ15126 192 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 PEAR1Q5VY43 1037 aaPredicted RBP5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 ATAD5Q96QE3 1844 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms