RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SMIM3Q9BZL3 60 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 WFDC1Q9HC57 220 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 Q9N2K0 584 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 GSKIPQ9P0R6 139 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 AK3Q9UIJ7 227 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 ZNF580Q9UK33 172 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 HSF4Q9ULV5 492 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 WASHC3Q9Y3C0 194 aa5.18□□□□□ -1.58
VCP-205ENST00000479300 RBM7Q9Y580 266 aaKnown RBP5.18□□□□□ -1.58
VCP-205ENST00000479300 HERC2O95714 4834 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 PLECQ15149 4684 aaKnown RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 SAA2-SAA4A0A096LPE2 208 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 TRBV6-6A0A0A6YYG2 114 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 SOCS1O15524 211 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 HPRT1P00492 218 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 TYMSP04818 313 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 CTSDP07339 412 aaPredicted RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 PFN1P07737 140 aaKnown RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 SAA2P0DJI9 122 aaPredicted RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 RPS16P62249 146 aaKnown RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 VAMP2P63027 116 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 UNC119Q13432 240 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 OR5I1Q13606 314 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 ARFRP1Q13795 201 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 ARL6IP1Q15041 203 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 ATP6V1FQ16864 119 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 ECSCRQ19T08 205 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 TMEM183BQ1AE95 376 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 DEFB136Q30KP8 78 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 ACTL10Q5JWF8 245 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 FAM90A2PQ658T7 463 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 ZFAND6Q6FIF0 208 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 ADAMTSL5Q6ZMM2 481 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 TCTEX1D1Q8N7M0 179 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 LRTM2Q8N967 370 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 OR1N2Q8NGR9 330 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 RNASE8Q8TDE3 154 aaKnown RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 MOB3AQ96BX8 217 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 GNPNAT1Q96EK6 184 aaPredicted RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 ABHD14BQ96IU4 210 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 UBE2E2Q96LR5 201 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 RNF5Q99942 180 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 AGMATQ9BSE5 352 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 PECRQ9BY49 303 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 PARP12Q9H0J9 701 aaKnown RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 LPAR5Q9H1C0 372 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 RBKSQ9H477 322 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 SDF2L1Q9HCN8 221 aa5.17□□□□□ -1.58
VCP-205ENST00000479300 SEPSECSQ9HD40 501 aaKnown RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 LYRM2Q9NU23 88 aaPredicted RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 LSM5Q9Y4Y9 91 aaKnown RBP5.17□□□□□ -1.58
VCP-205ENST00000479300 CRYM-AS1A6NIL9 109 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 M0R1X1 148 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 RRHO14718 337 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 ATP6V0E1O15342 81 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 CNIH1O95406 144 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 SCGB1D1O95968 90 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 NAPSAO96009 420 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 HIST1H1DP16402 221 aaKnown RBP5.16□□□□□ -1.58
VCP-205ENST00000479300 FHITP49789 147 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 RAB9AP51151 201 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 INSL3P51460 131 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 RPL39P5Q59GN2 51 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 ZNF880Q6PDB4 577 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 UNQ5815/PRO19632Q6UWF5 114 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 ZNF66Q6ZN08 573 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 PPP1R27Q86WC6 154 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 RNF152Q8N8N0 203 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 NUDT10Q8NFP7 164 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 NPBQ8NG41 125 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 OR11H1Q8NG94 326 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 OR2G3Q8NGZ4 309 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 FLYWCH2Q96CP2 140 aaKnown RBP5.16□□□□□ -1.58
VCP-205ENST00000479300 ARHGAP5-AS1Q96IT6 56 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 SLC35E1Q96K37 410 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 OR5B12Q96R08 314 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 SH3BGRL3Q9H299 93 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 IFI27L2Q9H2X8 130 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 FBXL15Q9H469 300 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 ZNF355PQ9NSJ1 428 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 FUT9Q9Y231 359 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 FOXA2Q9Y261 457 aaPredicted RBP5.16□□□□□ -1.58
VCP-205ENST00000479300 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
VCP-205ENST00000479300 IGHV7-81A0A0B4J1V7 117 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 MAP1LC3B2A6NCE7 125 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ZNF705FA8MVS1 300 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 G3V318 75 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 OVOL1O14753 267 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ST8SIA3O43173 380 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 NDUFA3O95167 84 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 HRASP01112 189 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 IFNA1P01562 189 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 SCTP09683 121 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ZNF705DP0CH99 300 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 ZNF705BP0CI00 300 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 CT45A6P0DMU7 189 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 CT45A5P0DMU8 189 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 CT45A7P0DMV0 189 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 GNB3P16520 340 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 CNTFRP26992 372 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms