RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SPP1P10451 314 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 RPL29P47914 159 aaKnown RBP10.03□□□□□ -0.8
CHD3-210ENST00000479080 SLURP1P55000 103 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 IFITM2Q01629 132 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 USF2Q15853 346 aaPredicted RBP10.03□□□□□ -0.8
CHD3-210ENST00000479080 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 SPSB3Q6PJ21 355 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 TOMM20LQ6UXN7 152 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 BAP18Q8IXM2 172 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 BPIFCQ8NFQ6 507 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 SPATA3Q8NHX4 192 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 PUS1Q9Y606 427 aaKnown RBP eCLIP10.03□□□□□ -0.8
CHD3-210ENST00000479080 PXMP4Q9Y6I8 212 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 CMYA5Q8N3K9 4069 aa10.02□□□□□ -0.8
CHD3-210ENST00000479080 TRAV30A0A087WSZ9 112 aa10.02□□□□□ -0.81
CHD3-210ENST00000479080 GGCTO75223 188 aaKnown RBP10.02□□□□□ -0.81
CHD3-210ENST00000479080 HSPB1P04792 205 aaKnown RBP10.02□□□□□ -0.81
CHD3-210ENST00000479080 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
CHD3-210ENST00000479080 OR11H1Q8NG94 326 aa10.02□□□□□ -0.81
CHD3-210ENST00000479080 TMEM158Q8WZ71 300 aa10.02□□□□□ -0.81
CHD3-210ENST00000479080 PSMG3Q9BT73 122 aaPredicted RBP10.02□□□□□ -0.81
CHD3-210ENST00000479080 ZNF747Q9BV97 191 aa10.02□□□□□ -0.81
CHD3-210ENST00000479080 SLC25A32Q9H2D1 315 aa10.02□□□□□ -0.81
CHD3-210ENST00000479080 TIMM9Q9Y5J7 89 aa10.02□□□□□ -0.81
CHD3-210ENST00000479080 NUDT19A8MXV4 375 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 LINC01619G3V211 115 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 NUPL2O15504 423 aaKnown RBP10.01□□□□□ -0.81
CHD3-210ENST00000479080 EIF3GO75821 320 aaKnown RBP eCLIP10.01□□□□□ -0.81
CHD3-210ENST00000479080 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
CHD3-210ENST00000479080 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
CHD3-210ENST00000479080 PLP1P60201 277 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 B2MP61769 119 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 FAM209BQ5JX69 171 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 MORN5Q5VZ52 161 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 OR51G1Q8NGK1 321 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 OR1N2Q8NGR9 330 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 OR2G3Q8NGZ4 309 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 SCGB1C1Q8TD33 95 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 TMED6Q8WW62 240 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 TMEM37Q8WXS4 190 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 TMEM190Q8WZ59 177 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 SLC39A9Q9NUM3 307 aa10.01□□□□□ -0.81
CHD3-210ENST00000479080 GAR1Q9NY12 217 aaKnown RBP10.01□□□□□ -0.81
CHD3-210ENST00000479080 NDUFA4O00483 81 aa10□□□□□ -0.81
CHD3-210ENST00000479080 IL4P05112 153 aa10□□□□□ -0.81
CHD3-210ENST00000479080 RD3LP0DJH9 198 aa10□□□□□ -0.81
CHD3-210ENST00000479080 ELLP55199 621 aaPredicted RBP10□□□□□ -0.81
CHD3-210ENST00000479080 RAB2AP61019 212 aa10□□□□□ -0.81
CHD3-210ENST00000479080 ZNF616Q08AN1 781 aa10□□□□□ -0.81
CHD3-210ENST00000479080 KLF5Q13887 457 aaPredicted RBP10□□□□□ -0.81
CHD3-210ENST00000479080 SPATA31B1PQ5VZV4 182 aa10□□□□□ -0.81
CHD3-210ENST00000479080 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
CHD3-210ENST00000479080 SSX7Q7RTT5 188 aa10□□□□□ -0.81
CHD3-210ENST00000479080 RNF125Q96EQ8 232 aa10□□□□□ -0.81
CHD3-210ENST00000479080 MRPL27Q9P0M9 148 aaKnown RBP10□□□□□ -0.81
CHD3-210ENST00000479080 DOK5Q9P104 306 aa10□□□□□ -0.81
CHD3-210ENST00000479080 CCL24O00175 119 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 ZNF207O43670 478 aaKnown RBP9.99□□□□□ -0.81
CHD3-210ENST00000479080 APOHP02749 345 aaPredicted RBP9.99□□□□□ -0.81
CHD3-210ENST00000479080 SEC11BP0C7V7 166 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 LYZP61626 148 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 SELENOTP62341 195 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 ZNF726P1Q15940 193 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 FFAR4Q5NUL3 377 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 FAM74A1Q5RGS3 127 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 ALKAL2Q6UX46 152 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 REC114Q7Z4M0 266 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
CHD3-210ENST00000479080 DLX4Q92988 240 aaPredicted RBP9.99□□□□□ -0.81
CHD3-210ENST00000479080 GNPNAT1Q96EK6 184 aaPredicted RBP9.99□□□□□ -0.81
CHD3-210ENST00000479080 TMEM213A2RRL7 107 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 C17orf112F2Z3M2 114 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 TSPAN15O95858 294 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 FHITP49789 147 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 SYNJ2BPP57105 145 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 RELQ04864 619 aaPredicted RBP9.98□□□□□ -0.81
CHD3-210ENST00000479080 RPEL1Q2QD12 228 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 IL34Q6ZMJ4 242 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 Q8WTZ3 238 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 UHRF2Q96PU4 802 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 RPRMQ9NS64 109 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 U3KQE9 123 aa9.98□□□□□ -0.81
CHD3-210ENST00000479080 TRRAPQ9Y4A5 3859 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 A8MWP6 167 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 H3BRN7 92 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 OR5G3P0C626 314 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 ORM2P19652 201 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 MYCNOSP40205 109 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 RAB31Q13636 194 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 TM4SF20Q53R12 229 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 C12orf54Q6X4T0 127 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 C1QL4Q86Z23 238 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 RPP25LQ8N5L8 163 aaKnown RBP9.97□□□□□ -0.81
CHD3-210ENST00000479080 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
CHD3-210ENST00000479080 TRAV5A0A0B4J249 113 aa9.96□□□□□ -0.82
CHD3-210ENST00000479080 LGALS9O00182 355 aa9.96□□□□□ -0.82
CHD3-210ENST00000479080 M6PRP20645 277 aa9.96□□□□□ -0.82
CHD3-210ENST00000479080 C4BPBP20851 252 aa9.96□□□□□ -0.82
CHD3-210ENST00000479080 ZP3P21754 424 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms