RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 MS4A6AQ9H2W1 248 aa11.66□□□□□ -0.54
GARNL3-215ENST00000478702 NUDT15Q9NV35 164 aa11.66□□□□□ -0.54
GARNL3-215ENST00000478702 DNAH10Q8IVF4 4471 aa11.66□□□□□ -0.54
GARNL3-215ENST00000478702 IGKV1D-37A0A075B6S9 117 aa11.65□□□□□ -0.54
GARNL3-215ENST00000478702 H3BP45 60 aa11.65□□□□□ -0.54
GARNL3-215ENST00000478702 LY6G6CO95867 125 aa11.65□□□□□ -0.54
GARNL3-215ENST00000478702 HNRNPCP07910 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
GARNL3-215ENST00000478702 PSG1P11464 419 aa11.65□□□□□ -0.54
GARNL3-215ENST00000478702 RPP30P78346 268 aaKnown RBP11.65□□□□□ -0.54
GARNL3-215ENST00000478702 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.54
GARNL3-215ENST00000478702 TBC1D24Q9ULP9 559 aa11.65□□□□□ -0.54
GARNL3-215ENST00000478702 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
GARNL3-215ENST00000478702 TRAV6A0A075B6T7 132 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 ZFP92A6NM28 416 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 NKX2-1P43699 371 aaPredicted RBP11.64□□□□□ -0.55
GARNL3-215ENST00000478702 APOC4P55056 127 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
GARNL3-215ENST00000478702 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
GARNL3-215ENST00000478702 APRG1Q8IVJ8 170 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 OR51G1Q8NGK1 321 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 RNF125Q96EQ8 232 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 OVOL2Q9BRP0 275 aa11.64□□□□□ -0.55
GARNL3-215ENST00000478702 WDR12Q9GZL7 423 aaKnown RBP11.64□□□□□ -0.55
GARNL3-215ENST00000478702 KIR2DL5BA0A0G2JN68 375 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 KIR2DL5BA0A0G2JPC4 375 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-215ENST00000478702 SSSCA1O60232 199 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 RPL11P62913 178 aaKnown RBP11.63□□□□□ -0.55
GARNL3-215ENST00000478702 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.55
GARNL3-215ENST00000478702 ASAH1Q13510 395 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 ZNF124Q15973 351 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 IAH1Q2TAA2 248 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-215ENST00000478702 SPANXN5Q5MJ07 72 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 KIR2DL5AQ8N109 375 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 ZBTB8BQ8NAP8 495 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-215ENST00000478702 STXBP6Q8NFX7 210 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 KIR2DL5BQ8NHK3 375 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 TRGV9Q99603 122 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 RABAC1Q9UI14 185 aa11.63□□□□□ -0.55
GARNL3-215ENST00000478702 STRAPQ9Y3F4 350 aaKnown RBP11.63□□□□□ -0.55
GARNL3-215ENST00000478702 IGKV1OR2-108A0A075B7D4 117 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 K7EQG2 157 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 ZNF90Q03938 601 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 OR8G2PQ6IF36 304 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 ACOT7LQ6ZUV0 252 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 WFDC3Q8IUB2 231 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 FAM24BQ8N5W8 94 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 ZNF431Q8TF32 576 aaPredicted RBP11.62□□□□□ -0.55
GARNL3-215ENST00000478702 SEC22CQ9BRL7 303 aa11.62□□□□□ -0.55
GARNL3-215ENST00000478702 RCL1Q9Y2P8 373 aaKnown RBP11.62□□□□□ -0.55
GARNL3-215ENST00000478702 AGRNO00468 2067 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 FAM240BA0A1B0GVZ2 78 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 HELTA6NFD8 242 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 UBE2CO00762 179 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 UPK1BO75841 260 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 SCGB1D2O95969 90 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 FABP1P07148 127 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 H2AFB2P0C5Z0 115 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 RPL35AP18077 110 aaKnown RBP11.61□□□□□ -0.55
GARNL3-215ENST00000478702 NUP62P37198 522 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-215ENST00000478702 EIF2B2P49770 351 aaKnown RBP11.61□□□□□ -0.55
GARNL3-215ENST00000478702 PMS2P11Q13670 270 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 ZNF846Q147U1 533 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 MZT2BQ6NZ67 158 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 Q6ZWC4 215 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 DCANP1Q8TF63 244 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 PSENENQ9NZ42 101 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 TP53TG1Q9Y2A0 90 aa11.61□□□□□ -0.55
GARNL3-215ENST00000478702 CCSO14618 274 aa11.6□□□□□ -0.55
GARNL3-215ENST00000478702 BUB3O43684 328 aa11.6□□□□□ -0.55
GARNL3-215ENST00000478702 DEFB131AP59861 70 aa11.6□□□□□ -0.55
GARNL3-215ENST00000478702 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
GARNL3-215ENST00000478702 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
GARNL3-215ENST00000478702 PBDC1Q9BVG4 233 aa11.6□□□□□ -0.55
GARNL3-215ENST00000478702 BATF3Q9NR55 127 aa11.6□□□□□ -0.55
GARNL3-215ENST00000478702 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 TSC22D2O75157 780 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 PAX9P55771 341 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 LYZP61626 148 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 AKR1C1Q04828 323 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 TMEM14EPQ6UXP3 125 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 SIGLEC15Q6ZMC9 328 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 STPG3Q8N7X2 389 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 RAB40CQ96S21 281 aa11.59□□□□□ -0.55
GARNL3-215ENST00000478702 A0A0J9YWU9 116 aa11.58□□□□□ -0.56
GARNL3-215ENST00000478702 CXorf65A6NEN9 183 aa11.58□□□□□ -0.56
GARNL3-215ENST00000478702 CCNKO75909 580 aa11.58□□□□□ -0.56
GARNL3-215ENST00000478702 MBPP02686 304 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-215ENST00000478702 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
GARNL3-215ENST00000478702 AP2S1P53680 142 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-215ENST00000478702 TAS2R30P59541 319 aa11.58□□□□□ -0.56
GARNL3-215ENST00000478702 OR2F1Q13607 317 aa11.58□□□□□ -0.56
GARNL3-215ENST00000478702 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
GARNL3-215ENST00000478702 C12orf45Q8N5I9 185 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-215ENST00000478702 RPP25LQ8N5L8 163 aaKnown RBP11.58□□□□□ -0.56
GARNL3-215ENST00000478702 NRN1Q9NPD7 142 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms