RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FOXI2Q6ZQN5 318 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 SPATA12Q7Z6I5 190 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 CCDC71LQ8N9Z2 235 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 C15orf53Q8NAA6 179 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 SLC24A4Q8NFF2 622 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 OR51G1Q8NGK1 321 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 NPIPB3Q92617 1050 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 Q9H521 79 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 SCPEP1Q9HB40 452 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 PFDN2Q9UHV9 154 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 U3KQE9 123 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 ABCA13Q86UQ4 5058 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 ZFP92A6NM28 416 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM25AB3EWG3 89 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM25CB3EWG5 89 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM25GB3EWG6 89 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 INS-IGF2F8WCM5 200 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 BUB3O43684 328 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 TMEM127O75204 238 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 TNFAIP8O95379 198 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 TOMM40O96008 361 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 PSG1P11464 419 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 NUP62P37198 522 aaPredicted RBP4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 RPS19P39019 145 aaKnown RBP4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 PSMB3P49720 205 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 CCL18P55774 89 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM3BP58499 235 aaPredicted RBP4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 SPCS3P61009 180 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 LYZP61626 148 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 DLK1P80370 383 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 Q8N1X5 172 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 ZNF709Q8N972 641 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 GPX8Q8TED1 209 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 RNF125Q96EQ8 232 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 ZNF486Q96H40 463 aaPredicted RBP4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 WDR12Q9GZL7 423 aaKnown RBP4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 KLK11Q9UBX7 282 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 CACNG5Q9UF02 275 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 PKD1P98161 4303 aa4.72□□□□□ -1.65
RTFDC1-206ENST00000477485 TEX13DA0A0J9YY54 714 aaPredicted RBP4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 ZNF705GA8MUZ8 300 aaPredicted RBP4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 HPGDSO60760 199 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 INSP01308 110 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 OR5AC1P0C628 307 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 P0C879 139 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 HTN1P15515 57 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 RND3P61587 244 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 OR2F1Q13607 317 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 MEF2DQ14814 521 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 OXA1LQ15070 435 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 BSXQ3C1V8 233 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 C2orf83Q53S99 150 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 OR8I2Q8N0Y5 310 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 C1orf158Q8N1D5 194 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 OR4C16Q8NGL9 310 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 OR13C8Q8NGS7 320 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 ZFAND1Q8TCF1 268 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 MARCH1Q8TCQ1 289 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 RNASEH2CQ8TDP1 164 aaKnown RBP4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 GPR146Q96CH1 333 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 SLC35E1Q96K37 410 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 C16orf92Q96LL3 132 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 SLC25A22Q9H936 323 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 SEPSECSQ9HD40 501 aaKnown RBP4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 RPRMQ9NS64 109 aa4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 C14orf166Q9Y224 244 aaKnown RBP4.71□□□□□ -1.66
RTFDC1-206ENST00000477485 GABARAPH6UMI1 98 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 M0R2Z0 102 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 GABARAPO95166 117 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 CD3DP04234 171 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 PRM2P04554 102 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 ZNF182P17025 639 aaPredicted RBP4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 ELK1P19419 428 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 UCP1P25874 307 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 ZNF90Q03938 601 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 FGL1Q08830 312 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 KLF9Q13886 244 aaPredicted RBP4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 FCN2Q15485 313 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 SPINK13Q1W4C9 94 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 TMEM268Q5VZI3 342 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 NOXA1Q86UR1 476 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 FAM219AQ8IW50 185 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 ARRDC1Q8N5I2 433 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 ZNRF2Q8NHG8 242 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 IGF2BP2-AS1Q96M15 143 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 ABHD1Q96SE0 405 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 PPP1R14DQ9NXH3 145 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 DOK5Q9P104 306 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 PAIP2BQ9ULR5 123 aaKnown RBP4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 FAT2Q9NYQ8 4349 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 DNAH2Q9P225 4427 aa4.7□□□□□ -1.66
RTFDC1-206ENST00000477485 A0A0J9YX75 114 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 LYRM9A8MSI8 78 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 EPM2AB3EWF7 344 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 ISLRO14498 428 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 RAB3DO95716 219 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 APOA1P02647 267 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 ATP5G1P05496 136 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 FABP1P07148 127 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms