RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 STPG3Q8N7X2 389 aa7.12□□□□□ -1.27
PGK1-204ENST00000477335 BPIFCQ8NFQ6 507 aa7.12□□□□□ -1.27
PGK1-204ENST00000477335 ST8SIA2Q92186 375 aa7.12□□□□□ -1.27
PGK1-204ENST00000477335 RCC1LQ96I51 464 aaKnown RBP7.12□□□□□ -1.27
PGK1-204ENST00000477335 RAX2Q96IS3 184 aa7.12□□□□□ -1.27
PGK1-204ENST00000477335 SLC25A32Q9H2D1 315 aa7.12□□□□□ -1.27
PGK1-204ENST00000477335 VSIRQ9H7M9 311 aa7.12□□□□□ -1.27
PGK1-204ENST00000477335 PEF1Q9UBV8 284 aaKnown RBP7.12□□□□□ -1.27
PGK1-204ENST00000477335 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
PGK1-204ENST00000477335 BORCS7-ASMTA0A0B4J1R7 106 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 WI2-2373I1.2A0A1W2PRP0 233 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 TOMM40O96008 361 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 SPP1P10451 314 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 SLURP1P55000 103 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 NSUN5P1Q3KNT7 163 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 TOMM20LQ6UXN7 152 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 PATE2Q6UY27 113 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 BAP18Q8IXM2 172 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 SPATA3Q8NHX4 192 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 SCGB1C1Q8TD33 95 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 ATP6V0BQ99437 205 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 MDFIQ99750 246 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
PGK1-204ENST00000477335 PXMP4Q9Y6I8 212 aa7.11□□□□□ -1.27
PGK1-204ENST00000477335 NUDT19A8MXV4 375 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 NUPL2O15504 423 aaKnown RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 GGCTO75223 188 aaKnown RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 MPDU1O75352 247 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 HSPB1P04792 205 aaKnown RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 HOXD3P31249 432 aaPredicted RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 RPL29P47914 159 aaKnown RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 ELLP55199 621 aaPredicted RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 RAB2AP61019 212 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 YPEL3P61236 119 aaPredicted RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 FHL3Q13643 280 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 USF2Q15853 346 aaPredicted RBP7.1□□□□□ -1.27
PGK1-204ENST00000477335 FAM74A1Q5RGS3 127 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 MORN5Q5VZ52 161 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 SPATA31B1PQ5VZV4 182 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 SPSB3Q6PJ21 355 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 NDUFA11Q86Y39 141 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 OR51G1Q8NGK1 321 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 TMED6Q8WW62 240 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 SLC39A9Q9NUM3 307 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 DOK5Q9P104 306 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 TIMM9Q9Y5J7 89 aa7.1□□□□□ -1.27
PGK1-204ENST00000477335 TRAV30A0A087WSZ9 112 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 CCL24O00175 119 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 ZNF207O43670 478 aaKnown RBP7.09□□□□□ -1.27
PGK1-204ENST00000477335 RD3LP0DJH9 198 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 CD33P20138 364 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 B2MP61769 119 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 ZNF616Q08AN1 781 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 ZNF726P1Q15940 193 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 FFAR4Q5NUL3 377 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 ZNF600Q6ZNG1 722 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 SSX7Q7RTT5 188 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 OR11H1Q8NG94 326 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 OR1N2Q8NGR9 330 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 OR2G3Q8NGZ4 309 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 TMEM37Q8WXS4 190 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 TMEM158Q8WZ71 300 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 PSMG3Q9BT73 122 aaPredicted RBP7.09□□□□□ -1.27
PGK1-204ENST00000477335 ZNF747Q9BV97 191 aa7.09□□□□□ -1.27
PGK1-204ENST00000477335 LINC01619G3V211 115 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 TSPAN15O95858 294 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
PGK1-204ENST00000477335 IL4P05112 153 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 SEC11BP0C7V7 166 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 FHITP49789 147 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 SYNJ2BPP57105 145 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 PLP1P60201 277 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 LYZP61626 148 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 TNP2Q05952 138 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
PGK1-204ENST00000477335 FAM209BQ5JX69 171 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 ADAMTSL5Q6ZMM2 481 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 TMEM190Q8WZ59 177 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 DLX4Q92988 240 aaPredicted RBP7.08□□□□□ -1.28
PGK1-204ENST00000477335 GNPNAT1Q96EK6 184 aaPredicted RBP7.08□□□□□ -1.28
PGK1-204ENST00000477335 RNF125Q96EQ8 232 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 UHRF2Q96PU4 802 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 RPRMQ9NS64 109 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 GAR1Q9NY12 217 aaKnown RBP7.08□□□□□ -1.28
PGK1-204ENST00000477335 MRPL27Q9P0M9 148 aaKnown RBP7.08□□□□□ -1.28
PGK1-204ENST00000477335 SELENOKQ9Y6D0 94 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 TRRAPQ9Y4A5 3859 aa7.08□□□□□ -1.28
PGK1-204ENST00000477335 IGHV3-49A0A0A0MS15 119 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 TRAV5A0A0B4J249 113 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 TMEM213A2RRL7 107 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 C17orf112F2Z3M2 114 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 NDUFA4O00483 81 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 ORM2P19652 201 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 C4BPBP20851 252 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 SELENOTP62341 195 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 RELQ04864 619 aaPredicted RBP7.07□□□□□ -1.28
PGK1-204ENST00000477335 RAB31Q13636 194 aa7.07□□□□□ -1.28
PGK1-204ENST00000477335 RPEL1Q2QD12 228 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms