RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CRYBB3P26998 211 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 S100A7P31151 101 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 RORCP51449 518 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 PIGPP57054 158 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 DHRS2Q13268 280 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 PVRIGQ6DKI7 326 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 SNX29P2Q8IUI4 249 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-214ENST00000477152 C14orf166Q9Y224 244 aaKnown RBP5.28□□□□□ -1.56
BRCA1-214ENST00000477152 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
BRCA1-214ENST00000477152 K7EQG2 157 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 HLA-DMBP28068 263 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 SPCS3P61009 180 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 DHODHQ02127 395 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
BRCA1-214ENST00000477152 OR52E5Q8NH55 327 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 RNASEH2CQ8TDP1 164 aaKnown RBP5.27□□□□□ -1.57
BRCA1-214ENST00000477152 NDUFAF3Q9BU61 184 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 APLNQ9ULZ1 77 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 IGHV4-28A0A0C4DH34 117 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 IGHV3-66A0A0C4DH42 116 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 SMIM9A6NGZ8 99 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 ZNF705EA8MWA4 302 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-214ENST00000477152 IFNA21P01568 189 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 IGHV3-48P01763 117 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 SLPIP03973 132 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 ID1P41134 155 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 TAS2R19P59542 299 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 YPEL3P61236 119 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-214ENST00000477152 SSBP1Q04837 148 aaKnown RBP5.27□□□□□ -1.57
BRCA1-214ENST00000477152 SOHLH1Q5JUK2 328 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 ACTL10Q5JWF8 245 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 SAMD13Q5VXD3 122 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 SUMO4Q6EEV6 95 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 CFAP161Q6P656 301 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 Q8NAQ8 132 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 FAM210BQ96KR6 192 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 ABHD1Q96SE0 405 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 AAMDCQ9H7C9 122 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 RABL2AQ9UBK7 228 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-214ENST00000477152 HSPB7Q9UBY9 170 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 RABL2BQ9UNT1 228 aa5.27□□□□□ -1.57
BRCA1-214ENST00000477152 IGHV4-4A0A075B6R2 117 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 DEFB131BA0A096LNP1 70 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 TEX13DA0A0J9YY54 714 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-214ENST00000477152 DISC1C4P0D8 188 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 DEFB4AO15263 64 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 ZNF688P0C7X2 276 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 RNASE2P10153 161 aaKnown RBP5.26□□□□□ -1.57
BRCA1-214ENST00000477152 ETV6P41212 452 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 ATP5IP56385 69 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-214ENST00000477152 LSM3P62310 102 aaKnown RBP5.26□□□□□ -1.57
BRCA1-214ENST00000477152 MRPS10P82664 201 aaKnown RBP5.26□□□□□ -1.57
BRCA1-214ENST00000477152 MEF2DQ14814 521 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 SPATA31B1PQ5VZV4 182 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 TERB2Q8NHR7 220 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 SCGB3A2Q96PL1 93 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 KCNIP3Q9Y2W7 256 aa5.26□□□□□ -1.57
BRCA1-214ENST00000477152 CEBPZOSA8MTT3 80 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 IGKV1-39P01597 117 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 APOHP02749 345 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-214ENST00000477152 AMBPP02760 352 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 IGKV1D-39P04432 117 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 SPART-AS1P0CW21 52 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 UCP1P25874 307 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 OR10J1P30954 320 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 SURF2Q15527 256 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-214ENST00000477152 SCGB2B2Q4G0G5 96 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 SPINK9Q5DT21 86 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 PSMG4Q5JS54 123 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 UBE2DNLQ8IWF7 75 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 TMEM229BQ8NBD8 167 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 YIPF6Q96EC8 236 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 RAB40CQ96S21 281 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 NRN1Q9NPD7 142 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
BRCA1-214ENST00000477152 A0A0B4J293 547 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 A0A1B0GU03 582 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 GABARAPH6UMI1 98 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 GABARAPO95166 117 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 RAB3DO95716 219 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 IFNA10P01566 189 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 C2orf83Q53S99 150 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 MZT2BQ6NZ67 158 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 C16orf54Q6UWD8 224 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 LHFPL1Q86WI0 220 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 POM121L12Q8N7R1 296 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 SLC24A4Q8NFF2 622 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 RBPMSQ93062 196 aaKnown RBP5.25□□□□□ -1.57
BRCA1-214ENST00000477152 TP53RKQ96S44 253 aa5.25□□□□□ -1.57
BRCA1-214ENST00000477152 KNCNA6PVL3 124 aa5.24□□□□□ -1.57
BRCA1-214ENST00000477152 HPGDSO60760 199 aa5.24□□□□□ -1.57
BRCA1-214ENST00000477152 TOMM40O96008 361 aa5.24□□□□□ -1.57
BRCA1-214ENST00000477152 IGKV1-5P01602 117 aa5.24□□□□□ -1.57
BRCA1-214ENST00000477152 IL4P05112 153 aa5.24□□□□□ -1.57
BRCA1-214ENST00000477152 RBMY1A1P0DJD3 496 aaKnown RBP5.24□□□□□ -1.57
BRCA1-214ENST00000477152 RBMY1CP0DJD4 496 aa5.24□□□□□ -1.57
BRCA1-214ENST00000477152 RD3LP0DJH9 198 aa5.24□□□□□ -1.57
BRCA1-214ENST00000477152 ZNF182P17025 639 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms