RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 HEYLQ9NQ87 328 aaPredicted RBP8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 KCNIP3Q9Y2W7 256 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 HELTA6NFD8 242 aa8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SCGB2A1O75556 95 aa8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 AP2S1P53680 142 aaPredicted RBP8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 KLF9Q13886 244 aaPredicted RBP8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TMEM268Q5VZI3 342 aa8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TRIQKQ629K1 86 aa8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SLC24A4Q8NFF2 622 aa8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SLC25A21Q9BQT8 299 aaPredicted RBP8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SRRQ9GZT4 340 aa8.84□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 NAP1L6A6NFF2 107 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CENPXA8MT69 81 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 FAM90A26D6RGX4 464 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 TOMM40O96008 361 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ANXA3P12429 323 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 HLA-DMBP28068 263 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SUPT4H1P63272 117 aaKnown RBP8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 DHRS2Q13268 280 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ETFRF1Q6IPR1 90 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 RNASE11Q8TAA1 199 aaKnown RBP8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NPIPB3Q92617 1050 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NARS2Q96I59 477 aaKnown RBP8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 BATF3Q9NR55 127 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 HSPB7Q9UBY9 170 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CACFD1Q9UGQ2 172 aa8.83□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 HERC2O95714 4834 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 IGLL5B9A064 214 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 H3BMM0 161 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 IL4P05112 153 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SULT1A3P0DMM9 295 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SULT1A4P0DMN0 295 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 PSG1P11464 419 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NPY1RP25929 384 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 EIF2B2P49770 351 aaKnown RBP8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 PSMG4Q5JS54 123 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 Q6ZTC4 211 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NRN1Q9NPD7 142 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CLEC5AQ9NY25 188 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 TBC1D24Q9ULP9 559 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 U3KQ87 197 aa8.82□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 IGKV1D-37A0A075B6S9 117 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 TRAV10A0A0B4J240 114 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 A0A0B4J2A0 478 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 A6NHS1 94 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CEBPZOSA8MTT3 80 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 RD3LP0DJH9 198 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CCR6P51684 374 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SRPXP78539 464 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 C12orf74Q32Q52 190 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NOXA1Q86UR1 476 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 C7orf50Q9BRJ6 194 aaKnown RBP8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SHPKQ9UHJ6 478 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CELA1Q9UNI1 258 aa8.81□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 IGHV4-4A0A075B6R2 117 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 PITX3O75364 302 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 HLA-DRB4P13762 266 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 AKR1C4P17516 323 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 GPX4P36969 197 aaPredicted RBP8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NKX2-1P43699 371 aaPredicted RBP8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ATP5IP56385 69 aaPredicted RBP8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CNPY1Q3B7I2 92 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 TMEM128Q5BJH2 165 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SIGLEC15Q6ZMC9 328 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ZNF705AQ6ZN79 300 aaPredicted RBP8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 LYZL2Q7Z4W2 148 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 S100ZQ8WXG8 99 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CLUHP3Q96NS8 147 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NEU1Q99519 415 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 RNF126Q9BV68 326 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 RBKSQ9H477 322 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 PRR13Q9NZ81 148 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 HLA-DRB4X5D2U9 266 aa8.8□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ZNF705FA8MVS1 300 aaPredicted RBP8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SOCS3O14543 225 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ZNF705DP0CH99 300 aaPredicted RBP8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ZNF705BP0CI00 300 aaPredicted RBP8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SNRPD3P62318 126 aaKnown RBP8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 GAMTQ14353 236 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 SMCO1Q147U7 214 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 BAK1Q16611 211 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 LGI3Q8N145 548 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 OR51G1Q8NGK1 321 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 DTD1Q8TEA8 209 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 RNF125Q96EQ8 232 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ACY3Q96HD9 319 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 C1QTNF4Q9BXJ3 329 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 WDR12Q9GZL7 423 aaKnown RBP8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 DNAH17Q9UFH2 4485 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 FAT2Q9NYQ8 4349 aa8.79□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 DNAH2Q9P225 4427 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 IFNA10P01566 189 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 AMBPP02760 352 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 IL7P13232 177 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 UBE2MP61081 183 aaKnown RBP8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 NUTF2P61970 127 aaKnown RBP8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 ZNF90Q03938 601 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 GDF5OSQ5U4N7 250 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms