RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TMEM268Q5VZI3 342 aa17.83■□□□□ 0.44
TMEM54-205ENST00000475208 ZNF705AQ6ZN79 300 aaPredicted RBP17.83■□□□□ 0.44
TMEM54-205ENST00000475208 C15orf40Q8WUR7 153 aa17.83■□□□□ 0.44
TMEM54-205ENST00000475208 NEU1Q99519 415 aa17.83■□□□□ 0.44
TMEM54-205ENST00000475208 NKX2-1P43699 371 aaPredicted RBP17.82■□□□□ 0.44
TMEM54-205ENST00000475208 EMP1P54849 157 aa17.82■□□□□ 0.44
TMEM54-205ENST00000475208 GPR141Q7Z602 305 aa17.82■□□□□ 0.44
TMEM54-205ENST00000475208 OR51G1Q8NGK1 321 aa17.82■□□□□ 0.44
TMEM54-205ENST00000475208 ZNF705FA8MVS1 300 aaPredicted RBP17.81■□□□□ 0.44
TMEM54-205ENST00000475208 ZNF705DP0CH99 300 aaPredicted RBP17.81■□□□□ 0.44
TMEM54-205ENST00000475208 ZNF705BP0CI00 300 aaPredicted RBP17.81■□□□□ 0.44
TMEM54-205ENST00000475208 SPART-AS1P0CW21 52 aa17.81■□□□□ 0.44
TMEM54-205ENST00000475208 PSG1P11464 419 aa17.81■□□□□ 0.44
TMEM54-205ENST00000475208 GDF5OSQ5U4N7 250 aa17.81■□□□□ 0.44
TMEM54-205ENST00000475208 NOXA1Q86UR1 476 aa17.81■□□□□ 0.44
TMEM54-205ENST00000475208 IGKV3-20P01619 116 aa17.8■□□□□ 0.44
TMEM54-205ENST00000475208 FXYD7P58549 80 aa17.8■□□□□ 0.44
TMEM54-205ENST00000475208 DEFB1P60022 68 aa17.8■□□□□ 0.44
TMEM54-205ENST00000475208 NMSQ5H8A3 153 aa17.8■□□□□ 0.44
TMEM54-205ENST00000475208 RNF125Q96EQ8 232 aa17.8■□□□□ 0.44
TMEM54-205ENST00000475208 IGHV3OR16-12A0A075B7B8 117 aa17.79■□□□□ 0.44
TMEM54-205ENST00000475208 TMEM189A5PLL7 270 aa17.79■□□□□ 0.44
TMEM54-205ENST00000475208 SMIM9A6NGZ8 99 aa17.79■□□□□ 0.44
TMEM54-205ENST00000475208 CRYM-AS1A6NIL9 109 aa17.79■□□□□ 0.44
TMEM54-205ENST00000475208 GABARAPH6UMI1 98 aa17.79■□□□□ 0.44
TMEM54-205ENST00000475208 SURF2Q15527 256 aaPredicted RBP17.79■□□□□ 0.44
TMEM54-205ENST00000475208 LGALS9BQ3B8N2 356 aa17.79■□□□□ 0.44
TMEM54-205ENST00000475208 PKD1P98161 4303 aa17.79■□□□□ 0.44
TMEM54-205ENST00000475208 IFNA10P01566 189 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 SULT1A3P0DMM9 295 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 SULT1A4P0DMN0 295 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 NUP62P37198 522 aaPredicted RBP17.78■□□□□ 0.44
TMEM54-205ENST00000475208 SSBP1Q04837 148 aaKnown RBP17.78■□□□□ 0.44
TMEM54-205ENST00000475208 SPCS2Q15005 226 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 UBE2DNLQ8IWF7 75 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 LINC00052Q96N35 136 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 PBDC1Q9BVG4 233 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 MIXL1Q9H2W2 232 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 TMEM56-RWDD3S4R434 201 aa17.78■□□□□ 0.44
TMEM54-205ENST00000475208 DISC1C4P0D8 188 aa17.77■□□□□ 0.44
TMEM54-205ENST00000475208 WDR12Q9GZL7 423 aaKnown RBP17.77■□□□□ 0.44
TMEM54-205ENST00000475208 SAV1Q9H4B6 383 aaPredicted RBP17.77■□□□□ 0.44
TMEM54-205ENST00000475208 CACFD1Q9UGQ2 172 aa17.77■□□□□ 0.44
TMEM54-205ENST00000475208 RFNGQ9Y644 331 aa17.77■□□□□ 0.44
TMEM54-205ENST00000475208 IGLV2-18A0A075B6J9 118 aa17.76■□□□□ 0.43
TMEM54-205ENST00000475208 IFNA21P01568 189 aa17.76■□□□□ 0.43
TMEM54-205ENST00000475208 OR8G2PQ6IF36 304 aa17.76■□□□□ 0.43
TMEM54-205ENST00000475208 FOXI2Q6ZQN5 318 aa17.76■□□□□ 0.43
TMEM54-205ENST00000475208 DKK2Q9UBU2 259 aa17.76■□□□□ 0.43
TMEM54-205ENST00000475208 PFDN2Q9UHV9 154 aa17.76■□□□□ 0.43
TMEM54-205ENST00000475208 GPR132Q9UNW8 380 aa17.76■□□□□ 0.43
TMEM54-205ENST00000475208 MRPS10P82664 201 aaKnown RBP17.75■□□□□ 0.43
TMEM54-205ENST00000475208 KLF9Q13886 244 aaPredicted RBP17.75■□□□□ 0.43
TMEM54-205ENST00000475208 FAM222AQ5U5X8 452 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 ZNF709Q8N972 641 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 OR4C16Q8NGL9 310 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 COQ8AQ8NI60 647 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 IL22RA2Q969J5 263 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 FAM210BQ96KR6 192 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 PRR13Q9NZ81 148 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 U3KQ87 197 aa17.75■□□□□ 0.43
TMEM54-205ENST00000475208 TEX48A0A1B0GUV7 120 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 CTDSP2O14595 271 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 ID1P41134 155 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 PSMB3P49720 205 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 CLVS1Q8IUQ0 354 aaPredicted RBP17.74■□□□□ 0.43
TMEM54-205ENST00000475208 LGI3Q8N145 548 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 OR4B1Q8NGF8 309 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 DTD1Q8TEA8 209 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 NIPSNAP3BQ9BS92 247 aa17.74■□□□□ 0.43
TMEM54-205ENST00000475208 ZFP92A6NM28 416 aa17.73■□□□□ 0.43
TMEM54-205ENST00000475208 RGS5O15539 181 aa17.73■□□□□ 0.43
TMEM54-205ENST00000475208 RAB2BQ8WUD1 216 aa17.73■□□□□ 0.43
TMEM54-205ENST00000475208 SMIM4Q8WVI0 70 aa17.73■□□□□ 0.43
TMEM54-205ENST00000475208 CLUHP3Q96NS8 147 aa17.73■□□□□ 0.43
TMEM54-205ENST00000475208 HSPB7Q9UBY9 170 aa17.73■□□□□ 0.43
TMEM54-205ENST00000475208 SOCS3O14543 225 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 AKAIN1P0CW23 69 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 SUPT4H1P63272 117 aaKnown RBP17.72■□□□□ 0.43
TMEM54-205ENST00000475208 ZNF90Q03938 601 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 GSG1LQ6UXU4 331 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 Q6ZR54 194 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 PRRT1Q99946 306 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 SLC35B3Q9H1N7 401 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 RBKSQ9H477 322 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 PLA2G2EQ9NZK7 142 aa17.72■□□□□ 0.43
TMEM54-205ENST00000475208 IGKV1D-37A0A075B6S9 117 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 HTN3P15516 51 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 CCR6P51684 374 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 TMBIM6P55061 237 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 LYZP61626 148 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 SMCO1Q147U7 214 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 ZNF79Q15937 498 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 OR51S1Q8NGJ8 323 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 DYNC2LI1Q8TCX1 351 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 SLC35E1Q96K37 410 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 BCL7BQ9BQE9 202 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 KCNIP3Q9Y2W7 256 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 GOLT1BQ9Y3E0 138 aa17.71■□□□□ 0.43
TMEM54-205ENST00000475208 GAMTQ14353 236 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms