RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ARV1Q9H2C2 271 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 RFNGQ9Y644 331 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 IGHV3-35A0A0C4DH35 117 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 AGPAT2O15120 278 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 BCL2L11O43521 198 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 MPDU1O75352 247 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 TOMM40O96008 361 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 IFNA5P01569 189 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 RD3LP0DJH9 198 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 FGF7P21781 194 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 HOXD3P31249 432 aaPredicted RBP7.66□□□□□ -1.18
COL8A1-206ENST00000474648 MYCNOSP40205 109 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 CAMLGP49069 296 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 SLURP1P55000 103 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 ZNF616Q08AN1 781 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 OPCMLQ14982 345 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 KRTAP21-3Q3LHN1 58 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 TOMM20LQ6UXN7 152 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 UNQ9165/PRO28630Q6UXU0 137 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 ZNF600Q6ZNG1 722 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 CYP2G1PQ6ZSU1 146 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 DPF1Q92782 380 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 PPP1R14BQ96C90 147 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
COL8A1-206ENST00000474648 VWFP04275 2813 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 KANTRA0A1W2PQU2 76 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 WI2-2373I1.2A0A1W2PRP0 233 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 JTBO76095 146 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 ZP3P21754 424 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 RPL29P47914 159 aaKnown RBP7.65□□□□□ -1.18
COL8A1-206ENST00000474648 RELQ04864 619 aaPredicted RBP7.65□□□□□ -1.18
COL8A1-206ENST00000474648 ZNF266Q14584 549 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 MIC13Q5XKP0 118 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 SCGB1C1Q8TD33 95 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 Q8WTZ3 238 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 DLX4Q92988 240 aaPredicted RBP7.65□□□□□ -1.18
COL8A1-206ENST00000474648 RCC1LQ96I51 464 aaKnown RBP7.65□□□□□ -1.18
COL8A1-206ENST00000474648 GINS3Q9BRX5 216 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 GGTLC1Q9BX51 225 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 NPCDR1Q9BY65 106 aa7.65□□□□□ -1.18
COL8A1-206ENST00000474648 PUS1Q9Y606 427 aaKnown RBP eCLIP7.65□□□□□ -1.18
COL8A1-206ENST00000474648 WNK1Q9H4A3 2382 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 DNHD1Q96M86 4753 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 BORCS7-ASMTA0A0B4J1R7 106 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 LGALS9O00182 355 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 NDUFA4O00483 81 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 YIF1AO95070 293 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 HNRNPCP07910 306 aaKnown RBP eCLIP7.64□□□□□ -1.19
COL8A1-206ENST00000474648 ATP6V0CP27449 155 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 SYNJ2BPP57105 145 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 PLP1P60201 277 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 SELENOTP62341 195 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 RAB31Q13636 194 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 RPEL1Q2QD12 228 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 IL34Q6ZMJ4 242 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 REC114Q7Z4M0 266 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 HSD17B11Q8NBQ5 300 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 BPIFCQ8NFQ6 507 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 SPATA3Q8NHX4 192 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 RSG1Q9BU20 258 aa7.64□□□□□ -1.19
COL8A1-206ENST00000474648 CMYA5Q8N3K9 4069 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 IGHV3OR16-8A0A075B7F1 116 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 SCGB2A1O75556 95 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 FABP1P07148 127 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 USF2Q15853 346 aaPredicted RBP7.63□□□□□ -1.19
COL8A1-206ENST00000474648 FAM106AQ4KMX7 169 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 PATE2Q6UY27 113 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 SLC51BQ86UW2 128 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 C1QL4Q86Z23 238 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 STPG3Q8N7X2 389 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 OR4F17Q8NGA8 305 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 OR51G1Q8NGK1 321 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 STOML3Q8TAV4 291 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 TMEM190Q8WZ59 177 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 OR4F4Q96R69 305 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 ZNF471Q9BX82 626 aaPredicted RBP7.63□□□□□ -1.19
COL8A1-206ENST00000474648 SH3BGRL3Q9H299 93 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 SLC39A9Q9NUM3 307 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 MRPL27Q9P0M9 148 aaKnown RBP7.63□□□□□ -1.19
COL8A1-206ENST00000474648 TIMM9Q9Y5J7 89 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 PXMP4Q9Y6I8 212 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 U3KQE9 123 aa7.63□□□□□ -1.19
COL8A1-206ENST00000474648 ZNF320A2RRD8 509 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 C17orf112F2Z3M2 114 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 K7EMT4 169 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 TSPAN15O95858 294 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 CFDP00746 253 aaPredicted RBP7.62□□□□□ -1.19
COL8A1-206ENST00000474648 APOHP02749 345 aaPredicted RBP7.62□□□□□ -1.19
COL8A1-206ENST00000474648 IL4P05112 153 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 EDN2P20800 178 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 B2MP61769 119 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 TM4SF20Q53R12 229 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 GCSAMLQ5JQS6 135 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 ADAMTSL5Q6ZMM2 481 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 BAP18Q8IXM2 172 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 LINC00482Q8N8I6 264 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 ZNF709Q8N972 641 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 TMEM37Q8WXS4 190 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms