RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 NPVFQ9HCQ7 196 aa11.9□□□□□ -0.5
COL1A1-204ENST00000474644 SMPXQ9UHP9 88 aa11.9□□□□□ -0.5
COL1A1-204ENST00000474644 ZNF256Q9Y2P7 627 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-204ENST00000474644 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 LYL1P12980 280 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 S100A11P31949 105 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 RAP2BP61225 183 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 HBG1P69891 147 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 HBG2P69892 147 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 NHLH2Q02577 135 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 OR2F1Q13607 317 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 LCN12Q6JVE5 192 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 LILRB2Q8N423 598 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 THAP6Q8TBB0 222 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 RNF125Q96EQ8 232 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
COL1A1-204ENST00000474644 AURKAIP1Q9NWT8 199 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-204ENST00000474644 IGHV3OR16-13A0A075B7E8 117 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 WI2-2373I1.2A0A1W2PRP0 233 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 CHEK1O14757 476 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 APOHP02749 345 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-204ENST00000474644 DEFA6Q01524 100 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 BAXQ07812 192 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 TEPPQ6URK8 271 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 Q6ZNX1 250 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 PRR25Q96S07 402 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 METTL26Q96S19 204 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 TMEM147Q9BVK8 224 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 UQCC1Q9NVA1 299 aa11.88□□□□□ -0.51
COL1A1-204ENST00000474644 LSM4Q9Y4Z0 139 aaKnown RBP11.88□□□□□ -0.51
COL1A1-204ENST00000474644 GP9P14770 177 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 NPPCP23582 126 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 GATA2P23769 480 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-204ENST00000474644 CRYBB3P26998 211 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
COL1A1-204ENST00000474644 LYZP61626 148 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 FGL1Q08830 312 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 Q5BKY6 102 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 TMEM182Q6ZP80 229 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-204ENST00000474644 CYP2G1PQ6ZSU1 146 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 OR5C1Q8NGR4 320 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 CHAC2Q8WUX2 184 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 ST8SIA2Q92186 375 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 PBDC1Q9BVG4 233 aa11.87□□□□□ -0.51
COL1A1-204ENST00000474644 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
COL1A1-204ENST00000474644 IGHV3-66A0A0C4DH42 116 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 UBE2L5PA0A1B0GUS4 154 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 HNRNPCP07910 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL1A1-204ENST00000474644 BMI1P35226 326 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 ATP6V1FQ16864 119 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 BPIFCQ8NFQ6 507 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 OR2T35Q8NGX2 323 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 RNF2Q99496 336 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 MGST2Q99735 147 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 VSIRQ9H7M9 311 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 WDR83OSQ9Y284 106 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 HSPB11Q9Y547 144 aa11.86□□□□□ -0.51
COL1A1-204ENST00000474644 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
COL1A1-204ENST00000474644 G3V3Q6 166 aa11.85□□□□□ -0.51
COL1A1-204ENST00000474644 CFDP00746 253 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-204ENST00000474644 SELENOTP62341 195 aa11.85□□□□□ -0.51
COL1A1-204ENST00000474644 CLINT1Q14677 625 aa11.85□□□□□ -0.51
COL1A1-204ENST00000474644 ZNF546Q86UE3 836 aa11.85□□□□□ -0.51
COL1A1-204ENST00000474644 NARS2Q96I59 477 aaKnown RBP11.85□□□□□ -0.51
COL1A1-204ENST00000474644 RABAC1Q9UI14 185 aa11.85□□□□□ -0.51
COL1A1-204ENST00000474644 U3KQE9 123 aa11.85□□□□□ -0.51
COL1A1-204ENST00000474644 A0A1W2PS18 150 aa11.84□□□□□ -0.51
COL1A1-204ENST00000474644 ZNF785A8K8V0 405 aa11.84□□□□□ -0.51
COL1A1-204ENST00000474644 K7EIL1 84 aa11.84□□□□□ -0.51
COL1A1-204ENST00000474644 AGPAT2O15120 278 aa11.84□□□□□ -0.51
COL1A1-204ENST00000474644 EIF2B2P49770 351 aaKnown RBP11.84□□□□□ -0.51
COL1A1-204ENST00000474644 GUCA2BQ16661 112 aa11.84□□□□□ -0.51
COL1A1-204ENST00000474644 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
COL1A1-204ENST00000474644 TMEM231Q9H6L2 316 aa11.84□□□□□ -0.51
COL1A1-204ENST00000474644 TSPAN4O14817 238 aa11.83□□□□□ -0.52
COL1A1-204ENST00000474644 LINC00869P0C866 280 aa11.83□□□□□ -0.52
COL1A1-204ENST00000474644 CAMLGP49069 296 aa11.83□□□□□ -0.52
COL1A1-204ENST00000474644 LAMTOR1Q6IAA8 161 aa11.83□□□□□ -0.52
COL1A1-204ENST00000474644 ATP5SQ99766 215 aa11.83□□□□□ -0.52
COL1A1-204ENST00000474644 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
COL1A1-204ENST00000474644 FXYD6-FXYD2A0A087WZ82 144 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 BUB3O43684 328 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 DFFBO76075 338 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 ORM2P19652 201 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 FGF7P21781 194 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 NUP62P37198 522 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-204ENST00000474644 FAM90A2PQ658T7 463 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 C16orf54Q6UWD8 224 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 TCF24Q7RTU0 167 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 STPG3Q8N7X2 389 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 OR1B1Q8NGR6 318 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 GRAMD2BQ96HH9 432 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 AQP10Q96PS8 301 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 SPAG8Q99932 426 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-204ENST00000474644 GGTLC1Q9BX51 225 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms