RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 IL3RAP26951 378 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 IER3P46695 156 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 CDC34P49427 236 aaPredicted RBP3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 UBE2G2P60604 165 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 ACOT6Q3I5F7 207 aaPredicted RBP3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 CT45A1Q5HYN5 189 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 COA6Q5JTJ3 125 aaKnown RBP3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 COL5A1-AS1Q5SY13 56 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 TREML4Q6UXN2 200 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 CYP2G1PQ6ZSU1 146 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 LINC00311Q8N616 119 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 STPG4Q8N801 248 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 OR9G1Q8NH87 305 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 CT45A3Q8NHU0 189 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 TMEM170AQ8WVE7 144 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 ZNF48Q96MX3 618 aaPredicted RBP3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 MIEN1Q9BRT3 115 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 CTDSP1Q9GZU7 261 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 JPT1Q9UK76 154 aa3.34□□□□□ -1.87
GAPVD1-216ENST00000474637 A0A1W2PRD5 423 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 A0A1W2PRF3 423 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 A0A1W2PRM7 423 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 M0QZ24 198 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 NDUFB4O95168 129 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 HTR1DP28221 377 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 CHRNA7P36544 502 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 VDAC2P45880 294 aaPredicted RBP3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 HLA-DRB5Q30154 266 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 CCDC144NLQ6NUI1 221 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 ERASQ7Z444 233 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 LYG1Q8N1E2 194 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 VPS25Q9BRG1 176 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 FAM103A1Q9BTL3 118 aaKnown RBP3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 VAMP8Q9BV40 100 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 IFI27L2Q9H2X8 130 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 MANBALQ9NQG1 85 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 TMEM140Q9NV12 185 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 DPM3Q9P2X0 92 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 WDR83OSQ9Y284 106 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 TRAPPC1Q9Y5R8 145 aa3.34□□□□□ -1.88
GAPVD1-216ENST00000474637 NF1P21359 2839 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ZNF320A2RRD8 509 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 PGPEP1LA6NFU8 196 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 BUB1B-PAK6H3BSN5 160 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 J3QR06 171 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 HOXA3O43365 443 aaPredicted RBP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 MMP23AO75900 390 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 OR5G3P0C626 314 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 MYOD1P15172 320 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ATP5G3P48201 142 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ERVK-16P61578 105 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 GNB1P62873 340 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 TMEM183BQ1AE95 376 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 PDLIM3Q53GG5 364 aaPredicted RBP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ACTL10Q5JWF8 245 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 FAM78BQ5VT40 261 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 MIC13Q5XKP0 118 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 OR4P4Q8NGL7 312 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 OR10X1Q8NGY0 326 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 OR2T10Q8NGZ9 312 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 OR52E5Q8NH55 327 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 MGST2Q99735 147 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ALKBH7Q9BT30 221 aaPredicted RBP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 DERL1Q9BUN8 251 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 HINT2Q9BX68 163 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 NPVFQ9HCQ7 196 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ESM1Q9NQ30 184 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 TCF19Q9Y242 345 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 TLN2Q9Y4G6 2542 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 WNK2Q9Y3S1 2297 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 NIPBLQ6KC79 2804 aaeCLIP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 NAV3Q8IVL0 2385 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 SAA2-SAA4A0A096LPE2 208 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 MDFIC2A0A1B0GVS7 189 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 TMEM89A2RUT3 159 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 FAM90A9PA6NNJ1 464 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 PRSS46E5RG02 174 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ITGB1BP1O14713 200 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 RBFOX2O43251 390 aaKnown RBP eCLIP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 NDUFB8O95169 186 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 HRASP01112 189 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 IGLV1-47P01700 117 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 SAA2P0DJI9 122 aaPredicted RBP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 OPRK1P41145 380 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 CDKN1BP46527 198 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 DLX1P56177 255 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 PRB3Q04118 309 aaPredicted RBP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 TPTE2P1Q5T6R2 138 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 OR4A47Q6IF82 309 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 Q6ZWC4 215 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 CMTM2Q8TAZ6 248 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 DDB2Q92466 427 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 ANAPC16Q96DE5 110 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 AJUBAQ96IF1 538 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 IMMP2LQ96T52 175 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 TXN2Q99757 166 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 HSPB9Q9BQS6 159 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 PYGO2Q9BRQ0 406 aa3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 SEPSECSQ9HD40 501 aaKnown RBP3.33□□□□□ -1.88
GAPVD1-216ENST00000474637 VPREB3Q9UKI3 123 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms