RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CGB7P0DN87 165 aa15.01□□□□□ -0.01
ECHDC1-214ENST00000474289 CD46P15529 392 aa15.01□□□□□ -0.01
ECHDC1-214ENST00000474289 KIR3DS1Q14943 382 aa15.01□□□□□ -0.01
ECHDC1-214ENST00000474289 HES3Q5TGS1 186 aa15.01□□□□□ -0.01
ECHDC1-214ENST00000474289 MED13Q9UHV7 2174 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15□□□□□ -0.01
ECHDC1-214ENST00000474289 DLL1O00548 723 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 IGHV3-48P01763 117 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 LGALS7P47929 136 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 GUSBP1Q15486 140 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 BHLHA15Q7RTS1 189 aaPredicted RBP15□□□□□ -0.01
ECHDC1-214ENST00000474289 LINC00305Q7Z4B0 112 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 TMEM186Q96B77 213 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 AP5S1Q9NUS5 200 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 ZNF492Q9P255 531 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 LTAP01374 205 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 SAA1P0DJI8 122 aaPredicted RBP15□□□□□ -0.01
ECHDC1-214ENST00000474289 OR2Z1Q8NG97 314 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 DEFB127Q9H1M4 99 aa15□□□□□ -0.01
ECHDC1-214ENST00000474289 KLK10O43240 276 aa14.99□□□□□ -0.01
ECHDC1-214ENST00000474289 APOHP02749 345 aaPredicted RBP14.99□□□□□ -0.01
ECHDC1-214ENST00000474289 INO80CQ6PI98 192 aaPredicted RBP14.99□□□□□ -0.01
ECHDC1-214ENST00000474289 ABI3Q9P2A4 366 aa14.99□□□□□ -0.01
ECHDC1-214ENST00000474289 DSCAMO60469 2012 aa14.99□□□□□ -0.01
ECHDC1-214ENST00000474289 MEOX1P50221 254 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 NPIPB3Q92617 1050 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 ZFHX4Q86UP3 3567 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 IGKV1D-37A0A075B6S9 117 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 TCRBV4S1A1TA0A5B7 111 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 CT45A6P0DMU7 189 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 CT45A5P0DMU8 189 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 CT45A7P0DMV0 189 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 TMEM116Q8NCL8 245 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 DAZAP1Q96EP5 407 aaKnown RBP14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 NPFFR1Q9GZQ6 430 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 JKAMPQ9P055 326 aa14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 HEATR1Q9H583 2144 aaKnown RBP14.98□□□□□ -0.01
ECHDC1-214ENST00000474289 HAX1O00165 279 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 GOSR1O95249 250 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 APOBEC3AP31941 199 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 GCSAMQ8N6F7 178 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 OR4A5Q8NH83 315 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 RAB37Q96AX2 223 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 FMC1Q96HJ9 113 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 KBTBD11-OT1A0A1B0GTJ5 212 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 E7EUB6 86 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 IGKV3-15P01624 115 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 VSTM2AQ8TAG5 236 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 DPF1Q92782 380 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 NDUFA4L2Q9NRX3 87 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 TANC2Q9HCD6 1990 aa14.97□□□□□ -0.01
ECHDC1-214ENST00000474289 PPIAL4GP0DN37 164 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 SAMD13Q5VXD3 122 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 BOD1L2Q8IYS8 172 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 MRPL36Q9P0J6 103 aaKnown RBP14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 ZNRD1Q9P1U0 126 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 SPCS1Q9Y6A9 102 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 NPIPB6E9PJ23 425 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 ACP1P24666 158 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 CSN1S1P47710 185 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 TCTAP57738 103 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 RBMXL3Q8N7X1 1067 aaKnown RBP14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 SPRR3Q9UBC9 169 aa14.96□□□□□ -0.01
ECHDC1-214ENST00000474289 A0A1W2PPM0 123 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 C9orf172C9J069 976 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 OVOL3O00110 214 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 COL8A1P27658 744 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 ERHP84090 104 aaKnown RBP14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 HSD52Q0P140 79 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 OR5A1Q8NGJ0 315 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 TNFRSF14Q92956 283 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 COL27A1Q8IZC6 1860 aaPredicted RBP14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 GNG7O60262 68 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 PLP1P60201 277 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 THYN1Q9P016 225 aa14.95□□□□□ -0.02
ECHDC1-214ENST00000474289 H3BTX0 84 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 TCRAP04437 139 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 CECR9P0C854 216 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 ORM2P19652 201 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 SPRNQ5BIV9 151 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 ADAMTSL5Q6ZMM2 481 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 UBALD2Q8IYN6 164 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 OR8A1Q8NGG7 326 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 RND1Q92730 232 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 A1L4Q6 167 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 SMIM17P0DL12 118 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 DUX4L9Q6RFH8 374 aaPredicted RBP14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 FA2HQ7L5A8 372 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 STXBP6Q8NFX7 210 aa14.94□□□□□ -0.02
ECHDC1-214ENST00000474289 A0A096LNJ9 63 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 SMAD7O15105 426 aaKnown RBP14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 FAM106CPP0CH98 169 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 NHLH1Q02575 133 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 FAM106AQ4KMX7 169 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 Q71RC1 249 aaPredicted RBP14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 CIARTQ8N365 385 aaPredicted RBP14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 TRAV8-1A0A0A6YYK1 113 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 WT1-ASQ06250 92 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 FAM201AQ5SY85 155 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms