RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 FAM24BQ8N5W8 94 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 COQ8AQ8NI60 647 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 SLC35E1Q96K37 410 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 IFNA21P01568 189 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 FABP1P07148 127 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 ANXA7P20073 488 aaKnown RBP8.23□□□□□ -1.09
CKS1B-206ENST00000474215 ID3Q02535 119 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 ZNF90Q03938 601 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 DHRS2Q13268 280 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 CNPY1Q3B7I2 92 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 C4orf46Q504U0 113 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 LEMD1Q68G75 181 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 LYG2Q86SG7 212 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 OR51G1Q8NGK1 321 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 DCANP1Q8TF63 244 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 PAIP2BQ9ULR5 123 aaKnown RBP8.23□□□□□ -1.09
CKS1B-206ENST00000474215 DNAH7Q8WXX0 4024 aa8.23□□□□□ -1.09
CKS1B-206ENST00000474215 IGKV1D-37A0A075B6S9 117 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 A0A0J9YWU9 116 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 LCE6AA0A183 80 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 SNRPGP15A8MWD9 76 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 PLA2G10O15496 165 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 BUB3O43684 328 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 GATAD1Q8WUU5 269 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 RNF125Q96EQ8 232 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 PBDC1Q9BVG4 233 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 PFDN2Q9UHV9 154 aa8.22□□□□□ -1.09
CKS1B-206ENST00000474215 PRSS46E5RG02 174 aa8.21□□□□□ -1.1
CKS1B-206ENST00000474215 ZNF688P0C7X2 276 aa8.21□□□□□ -1.1
CKS1B-206ENST00000474215 NUP62P37198 522 aaPredicted RBP8.21□□□□□ -1.1
CKS1B-206ENST00000474215 SPANXN5Q5MJ07 72 aa8.21□□□□□ -1.1
CKS1B-206ENST00000474215 OR8G2PQ6IF36 304 aa8.21□□□□□ -1.1
CKS1B-206ENST00000474215 STHQ8IWL8 128 aa8.21□□□□□ -1.1
CKS1B-206ENST00000474215 TRGV9Q99603 122 aa8.21□□□□□ -1.1
CKS1B-206ENST00000474215 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
CKS1B-206ENST00000474215 IGKV1OR2-108A0A075B7D4 117 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 LYRM1O43325 122 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 CA1P00915 261 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-206ENST00000474215 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-206ENST00000474215 NKX2-1P43699 371 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-206ENST00000474215 POLR2GP62487 172 aaKnown RBP eCLIP8.2□□□□□ -1.1
CKS1B-206ENST00000474215 OR2F1Q13607 317 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 SIGLEC15Q6ZMC9 328 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 LINC00299Q6ZSB3 139 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 THAP8Q8NA92 274 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 OR4D5Q8NGN0 318 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 MITD1Q8WV92 249 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 RARRES2Q99969 163 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 SEPSECSQ9HD40 501 aaKnown RBP8.2□□□□□ -1.1
CKS1B-206ENST00000474215 NRN1Q9NPD7 142 aa8.2□□□□□ -1.1
CKS1B-206ENST00000474215 CSMD3Q7Z407 3707 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 KNCNA6PVL3 124 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 H3BP45 60 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 CFDP00746 253 aaPredicted RBP8.19□□□□□ -1.1
CKS1B-206ENST00000474215 TCRBP04435 133 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 SNRPD3P62318 126 aaKnown RBP8.19□□□□□ -1.1
CKS1B-206ENST00000474215 EWSR1Q01844 656 aaKnown RBP eCLIP8.19□□□□□ -1.1
CKS1B-206ENST00000474215 IAH1Q2TAA2 248 aaPredicted RBP8.19□□□□□ -1.1
CKS1B-206ENST00000474215 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 ACTL10Q5JWF8 245 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 C1orf194Q5T5A4 169 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 TRPT1Q86TN4 253 aaKnown RBP8.19□□□□□ -1.1
CKS1B-206ENST00000474215 TMEM217Q8N7C4 229 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 OR11H2Q8NH07 326 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 SMIM8Q96KF7 97 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 RAB40CQ96S21 281 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 CCDC32Q9BV29 185 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 C20orf85Q9H1P6 137 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
CKS1B-206ENST00000474215 CXorf65A6NEN9 183 aa8.18□□□□□ -1.1
CKS1B-206ENST00000474215 SSSCA1O60232 199 aa8.18□□□□□ -1.1
CKS1B-206ENST00000474215 SPP1P10451 314 aa8.18□□□□□ -1.1
CKS1B-206ENST00000474215 PAX9P55771 341 aa8.18□□□□□ -1.1
CKS1B-206ENST00000474215 LYZP61626 148 aa8.18□□□□□ -1.1
CKS1B-206ENST00000474215 MORN3Q6PF18 240 aaPredicted RBP8.18□□□□□ -1.1
CKS1B-206ENST00000474215 PPP1R14BQ96C90 147 aa8.18□□□□□ -1.1
CKS1B-206ENST00000474215 GSKIPQ9P0R6 139 aa8.18□□□□□ -1.1
CKS1B-206ENST00000474215 TRAV6A0A075B6T7 132 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 GIG44P09565 113 aaPredicted RBP8.17□□□□□ -1.1
CKS1B-206ENST00000474215 TAS2R30P59541 319 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 AKR1C1Q04828 323 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 TMEM41BQ5BJD5 291 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 ACOT7LQ6ZUV0 252 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 TMEM144Q7Z5S9 345 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 ZBTB8BQ8NAP8 495 aaPredicted RBP8.17□□□□□ -1.1
CKS1B-206ENST00000474215 BPIFCQ8NFQ6 507 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 NUDT15Q9NV35 164 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 RYR2Q92736 4967 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 STARD9Q9P2P6 4700 aa8.17□□□□□ -1.1
CKS1B-206ENST00000474215 A6NHS1 94 aa8.16□□□□□ -1.1
CKS1B-206ENST00000474215 JTBO76095 146 aa8.16□□□□□ -1.1
CKS1B-206ENST00000474215 SCGB1D2O95969 90 aa8.16□□□□□ -1.1
CKS1B-206ENST00000474215 PMS2P11Q13670 270 aa8.16□□□□□ -1.1
CKS1B-206ENST00000474215 ZNF846Q147U1 533 aa8.16□□□□□ -1.1
CKS1B-206ENST00000474215 TMEM14EPQ6UXP3 125 aa8.16□□□□□ -1.1
CKS1B-206ENST00000474215 TMEM182Q6ZP80 229 aaPredicted RBP8.16□□□□□ -1.1
CKS1B-206ENST00000474215 OR8I2Q8N0Y5 310 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms