RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FBXL19-AS1Q494R0 122 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 AARDQ4LEZ3 155 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 FAM74A3Q4VXF1 159 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ABCA11PQ4W5N1 156 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CT45A1Q5HYN5 189 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SPIN3Q5JUX0 258 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LDLRAD2Q5SZI1 272 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 NCMAPQ5T1S8 102 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 PRAMEF5Q5TYX0 476 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TEX36Q5VZQ5 186 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 NCR3LG1Q68D85 454 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 THOC7Q6I9Y2 204 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 C11orf71Q6IPW1 123 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM14EPQ6UXP3 125 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 C19orf35Q6ZS72 473 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF833PQ6ZTB9 187 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 HSD17B13Q7Z5P4 300 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 KRTAP13-1Q8IUC0 172 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF695Q8IW36 515 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 STHQ8IWL8 128 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 BAP18Q8IXM2 172 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 Q8IYB0 196 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 VKORC1L1Q8N0U8 176 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LGI3Q8N145 548 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 EIF4E3Q8N5X7 224 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM252Q8N6L7 170 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF565Q8N9K5 539 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SPERTQ8NA61 448 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 UBAC2Q8NBM4 344 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 HSD17B11Q8NBQ5 300 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 INO80EQ8NBZ0 244 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ST6GALNAC3Q8NDV1 305 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DEFB108BQ8NET1 73 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 BPIFCQ8NFQ6 507 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OR5D13Q8NGL4 314 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OR5C1Q8NGR4 320 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OR8U1Q8NH10 309 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OR10J5Q8NHC4 309 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CT45A3Q8NHU0 189 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 RFESDQ8TAC1 157 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LINC01560Q8TB33 94 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LRRC20Q8TCA0 184 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 RBPMSQ93062 196 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 RNASE6Q93091 150 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IL22RA2Q969J5 263 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ARL11Q969Q4 196 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GPR146Q96CH1 333 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 C14orf79Q96F83 325 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SDSLQ96GA7 329 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SMIM8Q96KF7 97 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 WFIKKN1Q96NZ8 548 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SCGB3A2Q96PL1 93 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 S1PR3Q99500 378 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CCL13Q99616 98 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GINS3Q9BRX5 216 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 AGMATQ9BSE5 352 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 RSG1Q9BU20 258 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SUCNR1Q9BXA5 334 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 MRPL20Q9BYC9 149 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 MAGT1Q9H0U3 335 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DNTTIP1Q9H147 329 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM231Q9H6L2 316 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 VSIRQ9H7M9 311 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 METTL8Q9H825 291 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LINC00574Q9H8X3 128 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 RHOFQ9HBH0 211 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SPACA1Q9HBV2 294 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 KCNJ16Q9NPI9 418 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OR2S2Q9NQN1 319 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 PARP11Q9NR21 331 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 C19orf12Q9NSK7 152 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LYRM2Q9NU23 88 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 MED9Q9NWA0 146 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IDI2-AS1Q9NZ38 188 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 COMMD9Q9P000 198 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GSKIPQ9P0R6 139 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CLN8Q9UBY8 286 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 JPT1Q9UK76 154 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TRAPPC2LQ9UL33 140 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 PSG11Q9UQ72 335 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 MYCBP2O75592 4640 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV1OR2-108A0A075B7D4 117 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 TRGV10A0A0A0MS01 117 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 KBTBD11-OT1A0A1B0GTJ5 212 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1B0GV50 99 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1W2PRV1 198 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 RAB19A4D1S5 217 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 LRRC30A6NM36 301 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF729A6NN14 1252 aaPredicted RBP1.01□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF705EA8MWA4 302 aaPredicted RBP1.01□□□□□ -2.25
CCDC39-203ENST00000473854 E7EUB6 86 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 H0YJW9 148 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 PANO1I0J062 215 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 M0R1X1 148 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 ITGB1BP1O14713 200 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 SH2D1BO14796 132 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 RAB29O14966 203 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 AGPAT2O15120 278 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 NUPL2O15504 423 aaKnown RBP1.01□□□□□ -2.25
CCDC39-203ENST00000473854 CHST1O43916 411 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms