RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 IL15RAQ13261 267 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 LINC00322Q6ZN03 302 aaPredicted RBP13.52□□□□□ -0.25
SNX4-204ENST00000473417 SACSQ9NZJ4 4579 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 RYR2Q92736 4967 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 IGKV1D-37A0A075B6S9 117 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 IGHV3-66A0A0C4DH42 116 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 PMS2P5A8MQ11 134 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 TOMM40O96008 361 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 CD7P09564 240 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 RD3LP0DJH9 198 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 NPPCP23582 126 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 RAB32Q13637 225 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 ACOT7LQ6ZUV0 252 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 RNF2Q99496 336 aa13.51□□□□□ -0.25
SNX4-204ENST00000473417 TRAV25A0A0B4J276 109 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 PSG1P11464 419 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 BCAP31P51572 246 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 ZNF90Q03938 601 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 LAMTOR1Q6IAA8 161 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 ST8SIA2Q92186 375 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 METTL26Q96S19 204 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 WFDC10AQ9H1F0 79 aa13.5□□□□□ -0.25
SNX4-204ENST00000473417 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 IL4P05112 153 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 PVALBP20472 110 aaPredicted RBP13.49□□□□□ -0.25
SNX4-204ENST00000473417 CAV2P51636 162 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 RRAS2P62070 204 aaPredicted RBP13.49□□□□□ -0.25
SNX4-204ENST00000473417 AKR1C1Q04828 323 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 OR2F1Q13607 317 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 LILRB2Q8N423 598 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 OR10P1Q8NGE3 313 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 C11orf1Q9H5F2 150 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 ALG5Q9Y673 324 aa13.49□□□□□ -0.25
SNX4-204ENST00000473417 IGKV1OR2-108A0A075B7D4 117 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 FAM24AA6NFZ4 105 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 TSPAN4O14817 238 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 BMI1P35226 326 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 USF2Q15853 346 aaPredicted RBP13.48□□□□□ -0.25
SNX4-204ENST00000473417 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 THAP8Q8NA92 274 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 TRGV9Q99603 122 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 VSIRQ9H7M9 311 aa13.48□□□□□ -0.25
SNX4-204ENST00000473417 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 OR11H12B2RN74 326 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 FABP1P07148 127 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 CRYBB3P26998 211 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 H2BFSP57053 126 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 ARL16Q0P5N6 197 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 LRRC37A5PQ49AS3 106 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 TCF24Q7RTU0 167 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 SPAG8Q99932 426 aaPredicted RBP13.47□□□□□ -0.25
SNX4-204ENST00000473417 PBDC1Q9BVG4 233 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 NMES1Q9C002 83 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 SRD5A3Q9H8P0 318 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 MGAT4CQ9UBM8 478 aa13.47□□□□□ -0.25
SNX4-204ENST00000473417 A0A1W2PS18 150 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
SNX4-204ENST00000473417 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
SNX4-204ENST00000473417 DFFBO76075 338 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 HNRNPCP07910 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNX4-204ENST00000473417 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
SNX4-204ENST00000473417 DLK1P80370 383 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 RGS21Q2M5E4 152 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 FAM90A2PQ658T7 463 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 ZFAND6Q6FIF0 208 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 TMEM144Q7Z5S9 345 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 RNF125Q96EQ8 232 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 NARS2Q96I59 477 aaKnown RBP13.46□□□□□ -0.25
SNX4-204ENST00000473417 RETNQ9HD89 108 aa13.46□□□□□ -0.25
SNX4-204ENST00000473417 CST7O76096 145 aa13.45□□□□□ -0.26
SNX4-204ENST00000473417 TFPI2P48307 235 aa13.45□□□□□ -0.26
SNX4-204ENST00000473417 LYZP61626 148 aa13.45□□□□□ -0.26
SNX4-204ENST00000473417 RPL11P62913 178 aaKnown RBP13.45□□□□□ -0.26
SNX4-204ENST00000473417 CYCSP99999 105 aaKnown RBP13.45□□□□□ -0.26
SNX4-204ENST00000473417 GBGT1Q8N5D6 347 aa13.45□□□□□ -0.26
SNX4-204ENST00000473417 TMEM231Q9H6L2 316 aa13.45□□□□□ -0.26
SNX4-204ENST00000473417 RABAC1Q9UI14 185 aa13.45□□□□□ -0.26
SNX4-204ENST00000473417 U3KQE9 123 aa13.45□□□□□ -0.26
SNX4-204ENST00000473417 DEDDO75618 318 aa13.44□□□□□ -0.26
SNX4-204ENST00000473417 RLN2P04090 185 aa13.44□□□□□ -0.26
SNX4-204ENST00000473417 GATA2P23769 480 aaPredicted RBP13.44□□□□□ -0.26
SNX4-204ENST00000473417 P2RY1P47900 373 aa13.44□□□□□ -0.26
SNX4-204ENST00000473417 TMEM182Q6ZP80 229 aaPredicted RBP13.44□□□□□ -0.26
SNX4-204ENST00000473417 TMEM252Q8N6L7 170 aa13.44□□□□□ -0.26
SNX4-204ENST00000473417 TMEM217Q8N7C4 229 aa13.44□□□□□ -0.26
SNX4-204ENST00000473417 GRAMD2BQ96HH9 432 aa13.44□□□□□ -0.26
SNX4-204ENST00000473417 LYRM2Q9NU23 88 aaPredicted RBP13.44□□□□□ -0.26
SNX4-204ENST00000473417 IGSF23A1L1A6 192 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 OR4C46A6NHA9 309 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 SLC38A11Q08AI6 406 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 WFDC3Q8IUB2 231 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 FAM110AQ9BQ89 295 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 NPVFQ9HCQ7 196 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 OR5AC2Q9NZP5 309 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 UBQLN2Q9UHD9 624 aa13.43□□□□□ -0.26
SNX4-204ENST00000473417 LCE6AA0A183 80 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 FNDC10F2Z333 226 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 H0YIZ8 118 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms