RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 SELENOTP62341 195 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 RANP62826 216 aaKnown RBP3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 FAM120AOSQ5T036 256 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 ASPHD1Q5U4P2 390 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 CCDC144NLQ6NUI1 221 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 THAP8Q8NA92 274 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 FRZBQ92765 325 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 SFRP2Q96HF1 295 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 FAM167A-AS1Q96KT0 104 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 LINC00479Q96M42 142 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 MRPL32Q9BYC8 188 aaKnown RBP3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 RPH3ALQ9UNE2 315 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 KMT2BQ9UMN6 2715 aaPredicted RBP3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 IGHV2-70DA0A0C4DH43 119 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 GGTLC3B5MD39 225 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 PPP5D1E7EU14 171 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 CORTO00230 105 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 SLC17A3O00476 420 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HYPMO75409 117 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 IGHV3-23P01764 117 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 CRYGCP07315 174 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 TRGC1P0CF51 173 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 MGST1P10620 155 aaKnown RBP3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 PSG1P11464 419 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 CX3CL1P78423 397 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 C5orf64Q2M2E5 130 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 TIGITQ495A1 244 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 C1QL4Q86Z23 238 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 LINC00518Q8N0U6 118 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 NHLRC2Q8NBF2 726 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 TMEM116Q8NCL8 245 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 SGK494Q96LW2 274 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 RBM14Q96PK6 669 aaKnown RBP3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 RNF2Q99496 336 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 CCL19Q99731 98 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 SIRPDQ9H106 197 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 TRBV24-1A0A075B6N3 115 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 ELOA3CA0A087WX78 387 aaPredicted RBP3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 TRAV34A0A0B4J273 112 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 ZNF320A2RRD8 509 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 K7EN84 100 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BKO60814 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BJP06899 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BOP23527 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BBP33778 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 GNG4P50150 75 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 PDLIM4P50479 330 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BDP58876 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 ERVFC1-1P60608 527 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BCP62807 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST2H2BEQ16778 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 CENPWQ5EE01 88 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 KCNIP4Q6PIL6 250 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 C1orf122Q6ZSJ8 110 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 OR10G8Q8NGN5 311 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 SGMS2Q8NHU3 365 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BHQ93079 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 PERPQ96FX8 193 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 TBX15Q96SF7 602 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 TRGV9Q99603 122 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 C12orf57Q99622 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BNQ99877 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 HIST1H2BMQ99879 126 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 RASL11BQ9BPW5 248 aa3.86□□□□□ -1.79
TM4SF1-202ENST00000472441 SH2D7A6NKC9 451 aaPredicted RBP3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 I3L2K1 104 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 OVOL3O00110 214 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 UBE2CO00762 179 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 NDUFA3O95167 84 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 SAA4P35542 130 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 ATP5J2P56134 94 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 NPBQ8NG41 125 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 FAM168AQ92567 244 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 SERTAD4Q9NUC0 356 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 IGHV3OR16-8A0A075B7F1 116 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 A0A1W2PRE2 83 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 PGPA6NDG6 321 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 SPINK4O60575 86 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 NDUFS6O75380 124 aaKnown RBP3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 IGLC1P0CG04 106 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 FAM106CPP0CH98 169 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 RD3LP0DJH9 198 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 UBE2E1P51965 193 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 GNG5P63218 68 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 NDPQ00604 133 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 PAX2Q02962 417 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 PRR31Q5SQ13 230 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 MINOS1Q5TGZ0 78 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 GFI1BQ5VTD9 330 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 TEX38Q6PEX7 206 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 ZNF562Q6V9R5 426 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 ARPC1AQ92747 370 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 BBC3Q96PG8 261 aaPredicted RBP3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 RNASE7Q9H1E1 156 aaKnown RBP3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 SRD5A3Q9H8P0 318 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 MINOS1-NBL1R4GNA1 71 aa3.85□□□□□ -1.79
TM4SF1-202ENST00000472441 VWFP04275 2813 aa3.84□□□□□ -1.79
TM4SF1-202ENST00000472441 IGHV3-35A0A0C4DH35 117 aa3.84□□□□□ -1.79
TM4SF1-202ENST00000472441 IGHV4-61A0A0C4DH41 118 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms