RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 IAPPP10997 89 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 PSG1P11464 419 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
COL1A1-203ENST00000471344 INPP1P49441 399 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 IFITM3Q01628 133 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 DHRS2Q13268 280 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 PPP1R1AQ13522 171 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 ETFRF1Q6IPR1 90 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 OR1S1Q8NH92 325 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 PHLDA1Q8WV24 401 aaPredicted RBP11.19□□□□□ -0.62
COL1A1-203ENST00000471344 GRAMD2BQ96HH9 432 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 NARS2Q96I59 477 aaKnown RBP11.19□□□□□ -0.62
COL1A1-203ENST00000471344 TBC1D24Q9ULP9 559 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 U3KQ87 197 aa11.19□□□□□ -0.62
COL1A1-203ENST00000471344 IGKV1D-37A0A075B6S9 117 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 DUXBA0A1W2PPF3 345 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 PITX3O75364 302 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 NDUFB6O95139 128 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 RD3LP0DJH9 198 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 VAMP1P23763 118 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 ATP5IP56385 69 aaPredicted RBP11.18□□□□□ -0.62
COL1A1-203ENST00000471344 ZNF90Q03938 601 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 TMEM128Q5BJH2 165 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 TMEM217Q8N7C4 229 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 OR51G1Q8NGK1 321 aa11.18□□□□□ -0.62
COL1A1-203ENST00000471344 SLC25A21Q9BQT8 299 aaPredicted RBP11.18□□□□□ -0.62
COL1A1-203ENST00000471344 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
COL1A1-203ENST00000471344 IFNA4P05014 189 aa11.17□□□□□ -0.62
COL1A1-203ENST00000471344 GAMTQ14353 236 aa11.17□□□□□ -0.62
COL1A1-203ENST00000471344 Q8NAQ8 132 aa11.17□□□□□ -0.62
COL1A1-203ENST00000471344 CLEC5AQ9NY25 188 aa11.17□□□□□ -0.62
COL1A1-203ENST00000471344 FBXL17Q9UF56 701 aa11.17□□□□□ -0.62
COL1A1-203ENST00000471344 DNAH6Q9C0G6 4158 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 HELTA6NFD8 242 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 NAP1L6A6NFF2 107 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 FAM90A26D6RGX4 464 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 LYRM1O43325 122 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 BUB3O43684 328 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 SFT2D2O95562 160 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
COL1A1-203ENST00000471344 DEFB1P60022 68 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 SIGLEC15Q6ZMC9 328 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 LINC00299Q6ZSB3 139 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 CENPSQ8N2Z9 138 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 RNF125Q96EQ8 232 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 CCDC32Q9BV29 185 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 PBDC1Q9BVG4 233 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 MAGT1Q9H0U3 335 aa11.16□□□□□ -0.62
COL1A1-203ENST00000471344 IGHV4-28A0A0C4DH34 117 aa11.15□□□□□ -0.62
COL1A1-203ENST00000471344 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.62
COL1A1-203ENST00000471344 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.62
COL1A1-203ENST00000471344 SLC25A6P12236 298 aa11.15□□□□□ -0.62
COL1A1-203ENST00000471344 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.62
COL1A1-203ENST00000471344 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
COL1A1-203ENST00000471344 S100ZQ8WXG8 99 aa11.15□□□□□ -0.62
COL1A1-203ENST00000471344 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
COL1A1-203ENST00000471344 KLK5Q9Y337 293 aaPredicted RBP11.15□□□□□ -0.62
COL1A1-203ENST00000471344 IGKV1OR2-108A0A075B7D4 117 aa11.14□□□□□ -0.63
COL1A1-203ENST00000471344 ZFP92A6NM28 416 aa11.14□□□□□ -0.63
COL1A1-203ENST00000471344 HOXB5P09067 269 aa11.14□□□□□ -0.63
COL1A1-203ENST00000471344 EIF2B2P49770 351 aaKnown RBP11.14□□□□□ -0.63
COL1A1-203ENST00000471344 UBE2MP61081 183 aaKnown RBP11.14□□□□□ -0.63
COL1A1-203ENST00000471344 OR2F1Q13607 317 aa11.14□□□□□ -0.63
COL1A1-203ENST00000471344 RPP25LQ8N5L8 163 aaKnown RBP11.14□□□□□ -0.63
COL1A1-203ENST00000471344 SLC35E1Q96K37 410 aa11.14□□□□□ -0.63
COL1A1-203ENST00000471344 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
COL1A1-203ENST00000471344 NRN1Q9NPD7 142 aa11.14□□□□□ -0.63
COL1A1-203ENST00000471344 PAIP2BQ9ULR5 123 aaKnown RBP11.14□□□□□ -0.63
COL1A1-203ENST00000471344 X6R8D5 127 aa11.14□□□□□ -0.63
COL1A1-203ENST00000471344 C9orf170A2RU37 121 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 DEDDO75618 318 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 SPP1P10451 314 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 GPX4P36969 197 aaPredicted RBP11.13□□□□□ -0.63
COL1A1-203ENST00000471344 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
COL1A1-203ENST00000471344 LYZP61626 148 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 ZNF846Q147U1 533 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
COL1A1-203ENST00000471344 C20orf85Q9H1P6 137 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 TMED3Q9Y3Q3 217 aa11.13□□□□□ -0.63
COL1A1-203ENST00000471344 TRAV6A0A075B6T7 132 aa11.12□□□□□ -0.63
COL1A1-203ENST00000471344 CENPXA8MT69 81 aa11.12□□□□□ -0.63
COL1A1-203ENST00000471344 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-203ENST00000471344 PRSS46E5RG02 174 aa11.12□□□□□ -0.63
COL1A1-203ENST00000471344 H3BP45 60 aa11.12□□□□□ -0.63
COL1A1-203ENST00000471344 ADAP1O75689 374 aa11.12□□□□□ -0.63
COL1A1-203ENST00000471344 UPK1BO75841 260 aa11.12□□□□□ -0.63
COL1A1-203ENST00000471344 GGNBP1Q5YKI7 109 aa11.12□□□□□ -0.63
COL1A1-203ENST00000471344 MORN3Q6PF18 240 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-203ENST00000471344 ELOA3CA0A087WX78 387 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-203ENST00000471344 WRBO00258 174 aa11.11□□□□□ -0.63
COL1A1-203ENST00000471344 TCRBP04435 133 aa11.11□□□□□ -0.63
COL1A1-203ENST00000471344 OR4E1P0C645 316 aa11.11□□□□□ -0.63
COL1A1-203ENST00000471344 ASAH1Q13510 395 aa11.11□□□□□ -0.63
COL1A1-203ENST00000471344 MFFQ9GZY8 342 aa11.11□□□□□ -0.63
COL1A1-203ENST00000471344 H3BMM0 161 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms