RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MMP23AO75900 390 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 MSMBP08118 114 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 OR4E1P0C645 316 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV3-43DP0DP04 118 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 IGKV1-13P0DP09 117 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 SPNP16150 400 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 AKR1C4P17516 323 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 IL3RAP26951 378 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 RPL29P47914 159 aaKnown RBP3.45□□□□□ -1.86
CCDC39-202ENST00000471307 FXYD4P59646 89 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 VAMP3Q15836 100 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 LTC4SQ16873 150 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 CT45A1Q5HYN5 189 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 TMED4Q7Z7H5 227 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 SGPP2Q8IWX5 399 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF645Q8N7E2 425 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 TCTEX1D1Q8N7M0 179 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 CCDC71LQ8N9Z2 235 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF439Q8NDP4 499 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 OR11H6Q8NGC7 330 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 CT45A3Q8NHU0 189 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 SUN5Q8TC36 379 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 HSD17B10Q99714 261 aaKnown RBP3.45□□□□□ -1.86
CCDC39-202ENST00000471307 RTBDNQ9BSG5 229 aaPredicted RBP3.45□□□□□ -1.86
CCDC39-202ENST00000471307 SUCNR1Q9BXA5 334 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 FXYD6Q9H0Q3 95 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 Q9H3A6 140 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 MMP26Q9NRE1 261 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 CCL28Q9NRJ3 127 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 INSIG2Q9Y5U4 225 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 BAHCC1Q9P281 2608 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 CSPG4Q6UVK1 2322 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 MYO9AB2RTY4 2548 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 ZANQ9Y493 2812 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 NBPF19A0A087WUL8 3843 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV2-26A0A0B4J1V2 119 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 A0A0B4J2A0 478 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 LOC100131303A0A0U1RQF7 123 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 C3orf85A0A1B0GTC6 90 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 C9orf170A2RU37 121 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 C7orf66A4D0T2 115 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 CRYM-AS1A6NIL9 109 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 BUB1B-PAK6H3BSN5 160 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 J3QLI3 93 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 CREBL2O60519 120 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-202ENST00000471307 PGLYRP1O75594 196 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-202ENST00000471307 SFT2D2O95562 160 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 F2RP25116 425 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 CEACAM3P40198 252 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 UBE2E1P51965 193 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF137PP52743 207 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 PIGPP57054 158 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 RAB25P57735 213 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 BAMBIQ13145 260 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 SLAQ13239 276 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 TMEM249Q2WGJ8 235 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 FAM120AOSQ5T036 256 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 CYB5R2Q6BCY4 276 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF818PQ6ZRF7 136 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 VMO1Q7Z5L0 202 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 LYG2Q86SG7 212 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 APRG1Q8IVJ8 170 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 DRAM1Q8N682 238 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 OR10X1Q8NGY0 326 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF431Q8TF32 576 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-202ENST00000471307 RTN4IP1Q8WWV3 396 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-202ENST00000471307 LEAP2Q969E1 77 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 TMEM230Q96A57 120 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 GALNT14Q96FL9 552 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 ABHD14BQ96IU4 210 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 ADTRPQ96IZ2 230 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 PARP12Q9H0J9 701 aaKnown RBP3.44□□□□□ -1.86
CCDC39-202ENST00000471307 OR2D2Q9H210 308 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 IFI27L2Q9H2X8 130 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 OR51J1Q9H342 316 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 SLC2A9Q9NRM0 540 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 SDHAF2Q9NX18 166 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 SHPKQ9UHJ6 478 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 PRELID3BQ9Y3B1 194 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 AMMECR1Q9Y4X0 333 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-202ENST00000471307 ABCA2Q9BZC7 2435 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 CR1P17927 2039 aa3.44□□□□□ -1.86
CCDC39-202ENST00000471307 VPS13CQ709C8 3753 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 A0A1B0GWB2 263 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 ODF3BA8MYP8 253 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 LEUTXA8MZ59 168 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 OOSP1A8MZH6 123 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 H0Y980 276 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 RNASEK-C17orf49H0YIS7 233 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 LY6LH3BQJ8 138 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 M0R1X1 148 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 SLC31A2O15432 143 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 RBFOX2O43251 390 aaKnown RBP eCLIP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 CHST1O43916 411 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 ATG12O94817 140 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 CDS2O95674 445 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV3-7P01780 117 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 HLA-AP01891 365 aaKnown RBP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 ARG1P05089 322 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 SERPINE2P07093 398 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms