RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 IGKV3D-11A0A0A0MRZ8 115 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 IGLL5B9A064 214 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 PEX7O00628 323 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 LAMTOR5O43504 91 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 LTAP01374 205 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 SLC25A5P05141 298 aaKnown RBP3.44□□□□□ -1.86
VPS50-210ENST00000471188 PYYP10082 97 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 TTC32Q5I0X7 151 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 AAED1Q7RTV5 226 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 WDFY3Q8IZQ1 3526 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 TMEM54Q969K7 222 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 OR2H1Q9GZK4 316 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 KIAA0100Q14667 2235 aaKnown RBP3.44□□□□□ -1.86
VPS50-210ENST00000471188 LOC107984156A0A0G2JMH3 177 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 TCRBV4S1A1TA0A5B7 111 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 GAGE12JA6NER3 117 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 LINC00473A8K010 186 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 C2CD4DB7Z1M9 353 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 NPIPB6E9PJ23 425 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 H3BVH4 76 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 GAGE7O76087 117 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 OR2H2O95918 312 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 PLAUP00749 431 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 GAGE12FP0CL80 117 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 GAGE12GP0CL81 117 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 GAGE12IP0CL82 117 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 C8orf88P0DMB2 117 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 PCBD1P61457 104 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 ERVK11-1P61568 191 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 SSBP2P81877 361 aaPredicted RBP3.44□□□□□ -1.86
VPS50-210ENST00000471188 GAGE4Q13068 117 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 KLRD1Q13241 179 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 MOB3BQ86TA1 216 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 CDX2Q99626 313 aaPredicted RBP3.44□□□□□ -1.86
VPS50-210ENST00000471188 PRRG4Q9BZD6 226 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 FGF23Q9GZV9 251 aaPredicted RBP3.44□□□□□ -1.86
VPS50-210ENST00000471188 RPP21Q9H633 154 aaKnown RBP3.44□□□□□ -1.86
VPS50-210ENST00000471188 FRYQ5TBA9 3013 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 CFAP54Q96N23 3096 aa3.44□□□□□ -1.86
VPS50-210ENST00000471188 NBEAQ8NFP9 2946 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 TRAV3A0A0B4J244 114 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 A0A1B0GXF2 115 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 hADV38S2A0JD32 116 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 FAM106CPP0CH98 169 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 IFI27P40305 119 aaPredicted RBP3.43□□□□□ -1.86
VPS50-210ENST00000471188 ATP5J2P56134 94 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 FAM106AQ4KMX7 169 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 RBPMS2Q6ZRY4 209 aaKnown RBP3.43□□□□□ -1.86
VPS50-210ENST00000471188 FAM231DQ6ZW35 169 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 C3orf56Q8N813 242 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 ZNF441Q8N8Z8 693 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 ZBTB34Q8NCN2 500 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 ZNF502Q8TBZ5 544 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 PTH2Q96A98 100 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 HIST1H4GQ99525 98 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 CDIP1Q9H305 208 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 SLC25A10Q9UBX3 287 aaPredicted RBP3.43□□□□□ -1.86
VPS50-210ENST00000471188 TCF19Q9Y242 345 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 KLF13Q9Y2Y9 288 aaPredicted RBP3.43□□□□□ -1.86
VPS50-210ENST00000471188 LINC00312Q9Y6C7 94 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 EXPH5Q8NEV8 1989 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 AHCTF1Q8WYP5 2266 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 EML6Q6ZMW3 1958 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 LAMA1P25391 3075 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 CCDC179H3BU77 68 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 PRSS1P07477 247 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 CD27P26842 260 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 GNG3P63215 75 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 GAGE2BQ13066 116 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 NOGQ13253 232 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 CR1LQ2VPA4 569 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 GAGE2EQ4V326 116 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 OR5AN1Q8NGI8 311 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 ZNF503Q96F45 646 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 PAXXQ9BUH6 204 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 TM2D2Q9BX73 214 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 FSCN3Q9NQT6 498 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 RNF186Q9NXI6 227 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 SIGLEC8Q9NYZ4 499 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 DKK2Q9UBU2 259 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 GAGE2DQ9UEU5 116 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 TNFRSF18Q9Y5U5 241 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 CHD7Q9P2D1 2997 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 DSCAML1Q8TD84 2053 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 ARFGEF3Q5TH69 2177 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 ZGRF1Q86YA3 2104 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 TRBV6-6A0A0A6YYG2 114 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 A0A1B0GX78 115 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 C12orf77C9JDV5 145 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 NPIPB11E5RHQ5 1161 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 E9PLD3 99 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 H3BTX0 84 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 TGFAP01135 160 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 P0C879 139 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 CT45A10P0DMU9 189 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 PF4V1P10720 104 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 PSMB2P49721 201 aa3.43□□□□□ -1.86
VPS50-210ENST00000471188 BRWD1-AS2P59051 145 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms