RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 C16orf54Q6UWD8 224 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 Q6ZWC4 215 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 FAM24BQ8N5W8 94 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 KIR2DL5BQ8NHK3 375 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 CCDC32Q9BV29 185 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 PBDC1Q9BVG4 233 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 STRAPQ9Y3F4 350 aaKnown RBP11.6□□□□□ -0.55
HDAC6-218ENST00000470942 TRAV6A0A075B6T7 132 aa11.59□□□□□ -0.55
HDAC6-218ENST00000470942 H3BP45 60 aa11.59□□□□□ -0.55
HDAC6-218ENST00000470942 TCRBP04435 133 aa11.59□□□□□ -0.55
HDAC6-218ENST00000470942 FABP1P07148 127 aa11.59□□□□□ -0.55
HDAC6-218ENST00000470942 ID3Q02535 119 aa11.59□□□□□ -0.55
HDAC6-218ENST00000470942 ZNF90Q03938 601 aa11.59□□□□□ -0.55
HDAC6-218ENST00000470942 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
HDAC6-218ENST00000470942 CSMD3Q7Z407 3707 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 K7EQG2 157 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 SCGB1D2O95969 90 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 AP2S1P53680 142 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-218ENST00000470942 OR2F1Q13607 317 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 IAH1Q2TAA2 248 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-218ENST00000470942 LINC00299Q6ZSB3 139 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 OR4D5Q8NGN0 318 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 IL17DQ8TAD2 202 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 MITD1Q8WV92 249 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 GLMPQ8WWB7 406 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 S100ZQ8WXG8 99 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 CSTL1Q9H114 145 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 PSENENQ9NZ42 101 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 GSKIPQ9P0R6 139 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 TP53TG1Q9Y2A0 90 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 TENM2Q9NT68 2774 aa11.58□□□□□ -0.56
HDAC6-218ENST00000470942 A6NHS1 94 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 SNRPGP15A8MWD9 76 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 BUB3O43684 328 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 SSSCA1O60232 199 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 ZNF688P0C7X2 276 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 LYZP61626 148 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 RNF183Q96D59 192 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 TRGV9Q99603 122 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 PFDN2Q9UHV9 154 aa11.57□□□□□ -0.56
HDAC6-218ENST00000470942 AGRNO00468 2067 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 FAM240BA0A1B0GVZ2 78 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 NUP62P37198 522 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-218ENST00000470942 AKR1C1Q04828 323 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 SIGLEC15Q6ZMC9 328 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 STHQ8IWL8 128 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 THAP8Q8NA92 274 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 ZBTB8BQ8NAP8 495 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-218ENST00000470942 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 PPP1R14BQ96C90 147 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 NUDT15Q9NV35 164 aa11.56□□□□□ -0.56
HDAC6-218ENST00000470942 SMCO3A2RU48 225 aa11.55□□□□□ -0.56
HDAC6-218ENST00000470942 PRSS46E5RG02 174 aa11.55□□□□□ -0.56
HDAC6-218ENST00000470942 H2AFB2P0C5Z0 115 aa11.55□□□□□ -0.56
HDAC6-218ENST00000470942 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
HDAC6-218ENST00000470942 MZT2BQ6NZ67 158 aa11.55□□□□□ -0.56
HDAC6-218ENST00000470942 SMIM8Q96KF7 97 aa11.55□□□□□ -0.56
HDAC6-218ENST00000470942 SEC22CQ9BRL7 303 aa11.55□□□□□ -0.56
HDAC6-218ENST00000470942 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 IGKV1OR2-108A0A075B7D4 117 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 FAM25EA8MYX2 175 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 CCSO14618 274 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 ZNF846Q147U1 533 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 ACOT7LQ6ZUV0 252 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-218ENST00000470942 NRN1Q9NPD7 142 aa11.54□□□□□ -0.56
HDAC6-218ENST00000470942 A0A0J9YWU9 116 aa11.53□□□□□ -0.56
HDAC6-218ENST00000470942 KNCNA6PVL3 124 aa11.53□□□□□ -0.56
HDAC6-218ENST00000470942 CFDP00746 253 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-218ENST00000470942 CA1P00915 261 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-218ENST00000470942 PAX9P55771 341 aa11.53□□□□□ -0.56
HDAC6-218ENST00000470942 C12orf45Q8N5I9 185 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-218ENST00000470942 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
HDAC6-218ENST00000470942 RAB40CQ96S21 281 aa11.53□□□□□ -0.56
HDAC6-218ENST00000470942 WDR12Q9GZL7 423 aaKnown RBP11.53□□□□□ -0.56
HDAC6-218ENST00000470942 FBXL17Q9UF56 701 aa11.53□□□□□ -0.56
HDAC6-218ENST00000470942 TBC1D24Q9ULP9 559 aa11.53□□□□□ -0.56
HDAC6-218ENST00000470942 C5orf51A6NDU8 294 aa11.52□□□□□ -0.57
HDAC6-218ENST00000470942 CCNKO75909 580 aa11.52□□□□□ -0.57
HDAC6-218ENST00000470942 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
HDAC6-218ENST00000470942 GATA2P23769 480 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-218ENST00000470942 RRAS2P62070 204 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-218ENST00000470942 SNRPD3P62318 126 aaKnown RBP11.52□□□□□ -0.57
HDAC6-218ENST00000470942 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
HDAC6-218ENST00000470942 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
HDAC6-218ENST00000470942 PTTG2Q9NZH5 202 aa11.52□□□□□ -0.57
HDAC6-218ENST00000470942 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.57
HDAC6-218ENST00000470942 PMS2P5A8MQ11 134 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 L7N2F9 121 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 MBPP02686 304 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-218ENST00000470942 ORM2P19652 201 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 TAS2R30P59541 319 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 VAMP2P63027 116 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 ASAH1Q13510 395 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 C1orf194Q5T5A4 169 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms