RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ANKRD34BA5PLL1 514 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 NUDT19A8MXV4 375 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 BMPR1BO00238 502 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 GGCTO75223 188 aaKnown RBP7.58□□□□□ -1.2
CCM2-204ENST00000470837 IGKV1-17P01599 117 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 HBE1P02100 147 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 IL4P05112 153 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 H2AFB1P0C5Y9 115 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 PSG1P11464 419 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 GATA2P23769 480 aaPredicted RBP7.58□□□□□ -1.2
CCM2-204ENST00000470837 TAS2R45P59539 299 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 PRR20EP86478 221 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 PRR20CP86479 221 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 PRR20DP86480 221 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 PRR20BP86481 221 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 PRR20AP86496 221 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 FOXL1Q12952 345 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 C10orf113Q5VZT2 155 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 ZNF343Q6P1L6 599 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 FAM122CQ6P4D5 195 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 ZNF491Q8N8L2 437 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 RNF152Q8N8N0 203 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 GATAD1Q8WUU5 269 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 NARS2Q96I59 477 aaKnown RBP7.58□□□□□ -1.2
CCM2-204ENST00000470837 CCDC140Q96MF4 163 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 OR5B12Q96R08 314 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 DNAJC4Q9NNZ3 241 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 DOK5Q9P104 306 aa7.58□□□□□ -1.2
CCM2-204ENST00000470837 CTSGP08311 255 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 LGALS1P09382 135 aaKnown RBP7.57□□□□□ -1.2
CCM2-204ENST00000470837 CDC34P49427 236 aaPredicted RBP7.57□□□□□ -1.2
CCM2-204ENST00000470837 RPEL1Q2QD12 228 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 FAM106AQ4KMX7 169 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 FAM78BQ5VT40 261 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 C10orf99Q6UWK7 81 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 SFT2D1Q8WV19 159 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 DPF1Q92782 380 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 RNF125Q96EQ8 232 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 MRPL32Q9BYC8 188 aaKnown RBP7.57□□□□□ -1.2
CCM2-204ENST00000470837 RPRMQ9NS64 109 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 HIGD1AQ9Y241 93 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 PUS1Q9Y606 427 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCM2-204ENST00000470837 RFNGQ9Y644 331 aa7.57□□□□□ -1.2
CCM2-204ENST00000470837 IGHV3-35A0A0C4DH35 117 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 CTXND1A0A1B0GTU2 59 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 PPP5D1E7EU14 171 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 F8W735 103 aaPredicted RBP7.56□□□□□ -1.2
CCM2-204ENST00000470837 NDUFA4O00483 81 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 OR2C1O95371 312 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 ZP3P21754 424 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 CDX1P47902 265 aaPredicted RBP7.56□□□□□ -1.2
CCM2-204ENST00000470837 CLLU1Q5K131 121 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 C4orf3Q8WVX3 66 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 WFDC12Q8WWY7 111 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 CHRDL1Q9BU40 450 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 C20orf24Q9BUV8 137 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 HRH4Q9H3N8 390 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 VSIRQ9H7M9 311 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 SLC25A22Q9H936 323 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 TECRQ9NZ01 308 aaKnown RBP7.56□□□□□ -1.2
CCM2-204ENST00000470837 RABAC1Q9UI14 185 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 FUT9Q9Y231 359 aa7.56□□□□□ -1.2
CCM2-204ENST00000470837 TSSC4Q9Y5U2 329 aaPredicted RBP7.56□□□□□ -1.2
CCM2-204ENST00000470837 ZNF320A2RRD8 509 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 MAP1LC3B2A6NCE7 125 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 HSPB1P04792 205 aaKnown RBP7.55□□□□□ -1.2
CCM2-204ENST00000470837 BMI1P35226 326 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 FHITP49789 147 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 PLP1P60201 277 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
CCM2-204ENST00000470837 NDUFA5Q16718 116 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 KHDC3LQ587J8 217 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 GCSAMLQ5JQS6 135 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 LCN15Q6UWW0 184 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 LINC00305Q7Z4B0 112 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 RPP25LQ8N5L8 163 aaKnown RBP7.55□□□□□ -1.2
CCM2-204ENST00000470837 C11orf44Q8N8P7 122 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 KLHL30-AS1Q8NEE0 82 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 STXBP6Q8NFX7 210 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 MYOZ3Q8TDC0 251 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 RAB24Q969Q5 203 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 RCC1LQ96I51 464 aaKnown RBP7.55□□□□□ -1.2
CCM2-204ENST00000470837 METTL26Q96S19 204 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 MAP1LC3BQ9GZQ8 125 aa7.55□□□□□ -1.2
CCM2-204ENST00000470837 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
CCM2-204ENST00000470837 FN1P02751 2386 aaKnown RBP7.54□□□□□ -1.2
CCM2-204ENST00000470837 A0A1B0GV50 99 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 WI2-2373I1.2A0A1W2PRP0 233 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 SEC14L6B5MCN3 397 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 OR7C2O60412 319 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 CXorf1O96002 111 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 IFNA1P01562 189 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 NMBP08949 121 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 C8orf88P0DMB2 117 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 CD28P10747 220 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 NPPCP23582 126 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 ADMP35318 185 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 PPT1P50897 306 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 TOMM20LQ6UXN7 152 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms