RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 B4DEV8 164 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 ATP6V0E1O15342 81 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 IGLV2-14P01704 120 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 HBZP02008 142 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 ELLP55199 621 aaPredicted RBP6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 OR2B8PP59922 312 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 RAB11AP62491 216 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 MMDQ15546 238 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 ATP6V1FQ16864 119 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 OR8G2PQ6IF36 304 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 C8orf31Q8N9H6 132 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 OR52L2PQ8NGH6 319 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 MRGPRDQ8TDS7 321 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 GALMQ96C23 342 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 ZNF251Q9BRH9 671 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 TMEM147Q9BVK8 224 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 MAP1LC3BQ9GZQ8 125 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 WDR61Q9GZS3 305 aaKnown RBP6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 OR2D2Q9H210 308 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 VSIRQ9H7M9 311 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 RPRMQ9NS64 109 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 TIMM9Q9Y5J7 89 aa6.79□□□□□ -1.32
SYNGAP1-205ENST00000470232 A0A1W2PN81 502 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 RAB29O14966 203 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 TGOLN2O43493 480 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 CLN5O75503 358 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 S1PR2O95136 353 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 HLA-DRB1P01911 266 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 CHRNA7P36544 502 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 FGF8P55075 233 aaPredicted RBP6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 NDUFA6P56556 154 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 B2MP61769 119 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 CTAG1AP78358 180 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 SERF2P84101 59 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 ZNF726P1Q15940 193 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 OR2B11Q5JQS5 317 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 ZNF343Q6P1L6 599 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 TMEM14EPQ6UXP3 125 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 RPP25LQ8N5L8 163 aaKnown RBP6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 TMPRSS5Q9H3S3 457 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 RAB9BQ9NP90 201 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 SLC39A9Q9NUM3 307 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 VAX2Q9UIW0 290 aa6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 FOXA2Q9Y261 457 aaPredicted RBP6.78□□□□□ -1.32
SYNGAP1-205ENST00000470232 TGIF2-C20orf24A0A0A6YYL0 155 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 BRI3O95415 125 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 CXCL1P09341 107 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 FGF7P21781 194 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 G6PCP35575 357 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 RPL30P62888 115 aaKnown RBP6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 PAX5Q02548 391 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 TNFRSF9Q07011 255 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 Q3ZCU0 254 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 FAM90A2PQ658T7 463 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 TRAT1Q6PIZ9 186 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 CEMP1Q6PRD7 247 aaPredicted RBP6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 LINC00322Q6ZN03 302 aaPredicted RBP6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 ZNF66Q6ZN08 573 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 SSX7Q7RTT5 188 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 Q8WTZ3 238 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 C5orf30Q96GV9 206 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 NIT2Q9NQR4 276 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 HSPB7Q9UBY9 170 aa6.77□□□□□ -1.33
SYNGAP1-205ENST00000470232 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 IGHV7-81A0A0B4J1V7 117 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 IGHV3-43A0A0B4J1X8 118 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 CTXND1A0A1B0GTU2 59 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 SPINT2O43291 252 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 KRASP01116 189 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 IGHV3-11P01762 117 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 MBP02144 154 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 FABP1P07148 127 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 P0C879 139 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 IGHV3-43DP0DP04 118 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 HOXA5P20719 270 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 SSTR5P35346 364 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 EIF4EBP1Q13541 118 aaPredicted RBP6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 ELOBQ15370 118 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 ECSCRQ19T08 205 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 FFAR4Q5NUL3 377 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 LGALS9CQ6DKI2 356 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 SLC25A48Q6ZT89 311 aaKnown RBP6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 H2BFWTQ7Z2G1 175 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 ZNF709Q8N972 641 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 OR9G4Q8NGQ1 327 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 OR2K2Q8NGT1 345 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 DTD1Q8TEA8 209 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 FAM210BQ96KR6 192 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 RHOVQ96L33 236 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 CIB3Q96Q77 187 aaPredicted RBP6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 NABP2Q9BQ15 211 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 ACTR3CQ9C0K3 210 aaPredicted RBP6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 CTDSP1Q9GZU7 261 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 PLEKHA3Q9HB20 300 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 SDF2L1Q9HCN8 221 aa6.76□□□□□ -1.33
SYNGAP1-205ENST00000470232 GFOD1Q9NXC2 390 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms