RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 C11orf52Q96A22 123 aa13.52□□□□□ -0.25
PGAP1-208ENST00000470179 NUDT11Q96G61 164 aa13.52□□□□□ -0.25
PGAP1-208ENST00000470179 ARL2-SNX15V9GYD0 113 aa13.52□□□□□ -0.25
PGAP1-208ENST00000470179 SPTBN1Q01082 2364 aaKnown RBP13.52□□□□□ -0.25
PGAP1-208ENST00000470179 UBR5O95071 2799 aaPredicted RBP13.51□□□□□ -0.25
PGAP1-208ENST00000470179 FXYD7P58549 80 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 ITLN1Q8WWA0 313 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 DDB2Q92466 427 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 IGHV1-18A0A0C4DH31 117 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 THBDP07204 575 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 ADH4P08319 380 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 IGF2BP2-AS1Q96M15 143 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 TNFRSF19Q9NS68 423 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 ARHGAP32A7KAX9 2087 aa13.51□□□□□ -0.25
PGAP1-208ENST00000470179 RAB31Q13636 194 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 SLC25A2Q9BXI2 301 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 TMEM14BQ9NUH8 114 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 IGHV2OR16-5A0A0B4J2B6 119 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 OR2T8A6NH00 312 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 ORM2P19652 201 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 OR4S2Q8NH73 311 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
PGAP1-208ENST00000470179 TEX50A0A1B0GTY4 177 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 NPIPB3Q92617 1050 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 RITA1Q96K30 269 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 SLC25A33Q9BSK2 321 aa13.5□□□□□ -0.25
PGAP1-208ENST00000470179 MT-CO2P00403 227 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 SAA1P0DJI8 122 aaPredicted RBP13.49□□□□□ -0.25
PGAP1-208ENST00000470179 VAMP3Q15836 100 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 OR4F17Q8NGA8 305 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 FNDC4Q9H6D8 234 aaPredicted RBP13.49□□□□□ -0.25
PGAP1-208ENST00000470179 TPSG1Q9NRR2 321 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 WASHC3Q9Y3C0 194 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 MUC21A0A0G2JKD1 596 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 MUC21A0A140T8X8 626 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 SMIM27A0A1W2PRY6 76 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 M0R1B8 84 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 PPOXP50336 477 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 MUC21Q5SSG8 566 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 HCP5Q6MZN7 132 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 FAM167A-AS1Q96KT0 104 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 PGLYRP4Q96LB8 373 aa13.49□□□□□ -0.25
PGAP1-208ENST00000470179 RAI1Q7Z5J4 1906 aaPredicted RBP13.48□□□□□ -0.25
PGAP1-208ENST00000470179 CT45A6P0DMU7 189 aa13.48□□□□□ -0.25
PGAP1-208ENST00000470179 CT45A5P0DMU8 189 aa13.48□□□□□ -0.25
PGAP1-208ENST00000470179 CT45A7P0DMV0 189 aa13.48□□□□□ -0.25
PGAP1-208ENST00000470179 CCL3L1P16619 93 aa13.48□□□□□ -0.25
PGAP1-208ENST00000470179 TMEM249Q2WGJ8 235 aa13.48□□□□□ -0.25
PGAP1-208ENST00000470179 PATE2Q6UY27 113 aa13.48□□□□□ -0.25
PGAP1-208ENST00000470179 ALKBH7Q9BT30 221 aaPredicted RBP13.48□□□□□ -0.25
PGAP1-208ENST00000470179 NGBQ9NPG2 151 aa13.48□□□□□ -0.25
PGAP1-208ENST00000470179 C2orf70A6NJV1 201 aa13.47□□□□□ -0.25
PGAP1-208ENST00000470179 NUDT3O95989 172 aa13.47□□□□□ -0.25
PGAP1-208ENST00000470179 COX11Q9Y6N1 276 aa13.47□□□□□ -0.25
PGAP1-208ENST00000470179 A0A087X0K7 114 aa13.47□□□□□ -0.25
PGAP1-208ENST00000470179 OR10J3Q5JRS4 329 aa13.47□□□□□ -0.25
PGAP1-208ENST00000470179 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
PGAP1-208ENST00000470179 VPS13CQ709C8 3753 aa13.47□□□□□ -0.25
PGAP1-208ENST00000470179 GRNP28799 593 aaKnown RBP13.46□□□□□ -0.25
PGAP1-208ENST00000470179 MBD6Q96DN6 1003 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 JPT1Q9UK76 154 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 MALRD1Q5VYJ5 2156 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 IZUMO1RA6ND01 250 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 SRRM5B3KS81 715 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 PSG1P11464 419 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 CCL8P80075 99 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 SRSF1Q07955 248 aaKnown RBP eCLIP13.46□□□□□ -0.25
PGAP1-208ENST00000470179 TMEM116Q8NCL8 245 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 OR4C5Q8NGB2 326 aa13.46□□□□□ -0.25
PGAP1-208ENST00000470179 MGST3O14880 152 aa13.46□□□□□ -0.26
PGAP1-208ENST00000470179 HLA-DQA1P01909 254 aa13.46□□□□□ -0.26
PGAP1-208ENST00000470179 C8orf88P0DMB2 117 aa13.46□□□□□ -0.26
PGAP1-208ENST00000470179 CD40P25942 277 aa13.46□□□□□ -0.26
PGAP1-208ENST00000470179 RPL19P84098 196 aaKnown RBP13.46□□□□□ -0.26
PGAP1-208ENST00000470179 WDR73Q6P4I2 378 aa13.46□□□□□ -0.26
PGAP1-208ENST00000470179 TMEM108Q6UXF1 575 aa13.46□□□□□ -0.26
PGAP1-208ENST00000470179 TEX45Q8NA69 505 aa13.46□□□□□ -0.26
PGAP1-208ENST00000470179 MRPL20Q9BYC9 149 aaKnown RBP13.46□□□□□ -0.26
PGAP1-208ENST00000470179 OR4C46A6NHA9 309 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 NKX6-3A6NJ46 265 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 UBE2G1P62253 170 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 LDLRAD2Q5SZI1 272 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 TCTEX1D1Q8N7M0 179 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 RALYQ9UKM9 306 aaKnown RBP13.45□□□□□ -0.26
PGAP1-208ENST00000470179 DOPEY1Q5JWR5 2465 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 RNASE2P10153 161 aaKnown RBP13.45□□□□□ -0.26
PGAP1-208ENST00000470179 WT1-ASQ06250 92 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 UBE2V1Q13404 147 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 AARDQ4LEZ3 155 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 FBLN7Q53RD9 439 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 TPPP3Q9BW30 176 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 TMEM167BQ9NRX6 74 aa13.45□□□□□ -0.26
PGAP1-208ENST00000470179 OR1B1Q8NGR6 318 aa13.44□□□□□ -0.26
PGAP1-208ENST00000470179 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
PGAP1-208ENST00000470179 GTSF1Q8WW33 167 aa13.44□□□□□ -0.26
PGAP1-208ENST00000470179 FOXA2Q9Y261 457 aaPredicted RBP13.44□□□□□ -0.26
PGAP1-208ENST00000470179 NUP37Q8NFH4 326 aa13.44□□□□□ -0.26
PGAP1-208ENST00000470179 TXNDC17Q9BRA2 123 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms