RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CACNG8Q8WXS5 425 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 PUS1Q9Y606 427 aaKnown RBP eCLIP13.76□□□□□ -0.21
MRPL28-208ENST00000469744 PXMP4Q9Y6I8 212 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 TMEM250H0YL14 139 aa13.75□□□□□ -0.21
MRPL28-208ENST00000469744 YIF1AO95070 293 aa13.75□□□□□ -0.21
MRPL28-208ENST00000469744 FOLR2P14207 255 aa13.75□□□□□ -0.21
MRPL28-208ENST00000469744 IGLL1P15814 213 aa13.75□□□□□ -0.21
MRPL28-208ENST00000469744 MAS1LP35410 378 aa13.75□□□□□ -0.21
MRPL28-208ENST00000469744 HSPB9Q9BQS6 159 aa13.75□□□□□ -0.21
MRPL28-208ENST00000469744 A0A1W2PPV4 95 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 CRYGBP07316 175 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 SUB1P53999 127 aaKnown RBP eCLIP13.74□□□□□ -0.215e-8■■■■■ 37.7
MRPL28-208ENST00000469744 FLI1Q01543 452 aaPredicted RBP13.74□□□□□ -0.21
MRPL28-208ENST00000469744 MEF2BQ02080 365 aaPredicted RBP13.74□□□□□ -0.21
MRPL28-208ENST00000469744 RNF212Q495C1 297 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 RNASEH2CQ8TDP1 164 aaKnown RBP13.74□□□□□ -0.21
MRPL28-208ENST00000469744 RASL11BQ9BPW5 248 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 CNTFRP26992 372 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 CD69Q07108 199 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 LCNL1Q6ZST4 164 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 MMD2Q8IY49 270 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 RITA1Q96K30 269 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 TXNDC17Q9BRA2 123 aa13.74□□□□□ -0.21
MRPL28-208ENST00000469744 AP4M1O00189 453 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 MT-ND4LP03901 98 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 SLC35B1P78383 322 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 PRR20EP86478 221 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 PRR20CP86479 221 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 PRR20DP86480 221 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 PRR20BP86481 221 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 PRR20AP86496 221 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 MMDQ15546 238 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 SLC35E1Q96K37 410 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 ZNF430Q9H8G1 570 aaPredicted RBP13.73□□□□□ -0.21
MRPL28-208ENST00000469744 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
MRPL28-208ENST00000469744 CXorf65A6NEN9 183 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 STAG3L2P0CL84 134 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 STAG3L3P0CL85 134 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 CD81P60033 236 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 B2MP61769 119 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 RHOBP62745 196 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 AKIRIN2Q53H80 203 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 MIC13Q5XKP0 118 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 C20orf24Q9BUV8 137 aa13.72□□□□□ -0.21
MRPL28-208ENST00000469744 CGB1A6NKQ9 187 aa13.71□□□□□ -0.21
MRPL28-208ENST00000469744 CXorf1O96002 111 aa13.71□□□□□ -0.21
MRPL28-208ENST00000469744 MRGPRG-AS1Q2M3A8 158 aa13.71□□□□□ -0.21
MRPL28-208ENST00000469744 KLHL30-AS1Q8NEE0 82 aa13.71□□□□□ -0.21
MRPL28-208ENST00000469744 TNCP24821 2201 aa13.71□□□□□ -0.22
MRPL28-208ENST00000469744 SLC25A17O43808 307 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 RPLP1P05386 114 aaKnown RBP13.7□□□□□ -0.22
MRPL28-208ENST00000469744 LINC00869P0C866 280 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 CEBPGP53567 150 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 PSG5Q15238 335 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 PRSS8Q16651 343 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 STPG3Q8N7X2 389 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 OR10W1Q8NGF6 305 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 HIST1H2BAQ96A08 127 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 DUX3Q96PT4 197 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 TMPRSS5Q9H3S3 457 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 SDF2L1Q9HCN8 221 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 TMEM242Q9NWH2 141 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 PRELID1Q9Y255 219 aa13.7□□□□□ -0.22
MRPL28-208ENST00000469744 AKR1C3P42330 323 aa13.69□□□□□ -0.22
MRPL28-208ENST00000469744 GAMTQ14353 236 aa13.69□□□□□ -0.22
MRPL28-208ENST00000469744 TEX38Q6PEX7 206 aa13.69□□□□□ -0.22
MRPL28-208ENST00000469744 LINC00482Q8N8I6 264 aa13.69□□□□□ -0.22
MRPL28-208ENST00000469744 YPEL4Q96NS1 127 aa13.69□□□□□ -0.22
MRPL28-208ENST00000469744 SRSF8Q9BRL6 282 aaKnown RBP13.69□□□□□ -0.22
MRPL28-208ENST00000469744 AURKAIP1Q9NWT8 199 aaPredicted RBP13.69□□□□□ -0.22
MRPL28-208ENST00000469744 NAT8Q9UHE5 227 aa13.69□□□□□ -0.22
MRPL28-208ENST00000469744 ZNF727A8MUV8 499 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 F6UZH7 168 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
MRPL28-208ENST00000469744 PDE6DO43924 150 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 OR2C1O95371 312 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 MT-CO2P00403 227 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 WT1-ASQ06250 92 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 GCSAMLQ5JQS6 135 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 CYP2G1PQ6ZSU1 146 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 SLC16A13Q7RTY0 426 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 MLXQ9UH92 298 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 ARL2-SNX15V9GYD0 113 aa13.68□□□□□ -0.22
MRPL28-208ENST00000469744 E7EUB6 86 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 NBR2O15453 112 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 PAGE4O60829 102 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 RPL27AP46776 148 aaKnown RBP13.67□□□□□ -0.22
MRPL28-208ENST00000469744 DEFB136Q30KP8 78 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 ETFRF1Q6IPR1 90 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 RNF2Q99496 336 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 CTDSP1Q9GZU7 261 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 CLN5O75503 358 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 CFHR3Q02985 330 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 TMEM241Q24JQ0 296 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 THAP8Q8NA92 274 aa13.67□□□□□ -0.22
MRPL28-208ENST00000469744 MRAPQ8TCY5 172 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms