RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SSX2Q16385 188 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 C8orf46Q8TAG6 207 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 PERPQ96FX8 193 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 NAT8BQ9UHF3 227 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 RPH3ALQ9UNE2 315 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 HILPDAQ9Y5L2 63 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 SMIM27A0A1W2PRY6 76 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 PAX1P15863 534 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 PLGLAQ15195 96 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 TMEM136Q6ZRR5 245 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 BAGE2Q86Y30 109 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 GNB1LQ9BYB4 327 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 A0A1W2PRD5 423 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 A0A1W2PRF3 423 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 A0A1W2PRM7 423 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 PRR27Q6MZM9 219 aa11.68□□□□□ -0.54
CBWD3-205ENST00000469687 PGPA6NDG6 321 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 SCGB1D1O95968 90 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 RBP4P02753 201 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 LIPFP07098 398 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 RAB4BP61018 213 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 LY6G5BQ8NDX9 201 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 MS4A10Q96PG2 267 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 HIVEP3Q5T1R4 2406 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 HYPMO75409 117 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 SLC25A5P05141 298 aaKnown RBP11.67□□□□□ -0.54
CBWD3-205ENST00000469687 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 PSG1P11464 419 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 GP9P14770 177 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 KLRB1Q12918 225 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 MMDQ15546 238 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 Q6ZWC4 215 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
CBWD3-205ENST00000469687 GNB4Q9HAV0 340 aa11.67□□□□□ -0.54
CBWD3-205ENST00000469687 A8MWP6 167 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 I3L2K1 104 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 CORTO00230 105 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
CBWD3-205ENST00000469687 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 LYZP61626 148 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 NUDT10Q8NFP7 164 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 NUDT11Q96G61 164 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 NCOR2Q9Y618 2525 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 CHD8Q9HCK8 2581 aa11.66□□□□□ -0.54
CBWD3-205ENST00000469687 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 MBD6Q96DN6 1003 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 RAB1BQ9H0U4 201 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 C7orf69Q9H7B7 122 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 CNIH1O95406 144 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 TMEM183BQ1AE95 376 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 C11orf71Q6IPW1 123 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
CBWD3-205ENST00000469687 IZUMO1RA6ND01 250 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 AMY1AP04745 511 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-205ENST00000469687 HTR1DP28221 377 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 PRR31Q5SQ13 230 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 Q71RC1 249 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-205ENST00000469687 STXBP6Q8NFX7 210 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 CFHR4Q92496 578 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 RCHY1Q96PM5 261 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 CBLN4Q9NTU7 201 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 POLR3KQ9Y2Y1 108 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-205ENST00000469687 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 VPS13CQ709C8 3753 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 AKAP6Q13023 2319 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 A0A1W2PPR1 153 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 BMPR1BO00238 502 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 ESDP10768 282 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 PLP1P60201 277 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 PAX2Q02962 417 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 Q0VG73 95 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 SLAQ13239 276 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 KLF17Q5JT82 389 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-205ENST00000469687 WDR73Q6P4I2 378 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 LINC00322Q6ZN03 302 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-205ENST00000469687 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 NAGKQ9UJ70 344 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 S4R3C0 116 aa11.64□□□□□ -0.55
CBWD3-205ENST00000469687 IGKV1-17P01599 117 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 CDKN1AP38936 164 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 TPPP2P59282 170 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 UBE2G1P62253 170 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 FAM231DQ6ZW35 169 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 NUP35Q8NFH5 326 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 OR11H6Q8NGC7 330 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 HSPB9Q9BQS6 159 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 Q9H3A6 140 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 DPM3Q9P2X0 92 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 HIGD1AQ9Y241 93 aa11.63□□□□□ -0.55
CBWD3-205ENST00000469687 VWC2LB2RUY7 222 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 K7EIM0 57 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 TOX4O94842 621 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms