RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ZNF705DP0CH99 300 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-204ENST00000469207 ZNF705BP0CI00 300 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-204ENST00000469207 SPART-AS1P0CW21 52 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 HLA-DRB4P13762 266 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 TAS2R19P59542 299 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 NUTF2P61970 127 aaKnown RBP8.74□□□□□ -1.01
HDAC3-204ENST00000469207 ZNF90Q03938 601 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 CTF1Q16619 201 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 FAM219AQ8IW50 185 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 PBDC1Q9BVG4 233 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 C1QTNF4Q9BXJ3 329 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 SLC35B3Q9H1N7 401 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 GPR132Q9UNW8 380 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 C14orf166Q9Y224 244 aaKnown RBP8.74□□□□□ -1.01
HDAC3-204ENST00000469207 HLA-DRB4X5D2U9 266 aa8.74□□□□□ -1.01
HDAC3-204ENST00000469207 CTDSP2O14595 271 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 TNFAIP8O95379 198 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 IFNA10P01566 189 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 PRM2P04554 102 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 HTN3P15516 51 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 ZNF182P17025 639 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-204ENST00000469207 TBPP20226 339 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 ZNF709Q8N972 641 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 OR4B1Q8NGF8 309 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 MUC4Q99102 2169 aa8.73□□□□□ -1.01
HDAC3-204ENST00000469207 HSPG2P98160 4391 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 IGKV1D-37A0A075B6S9 117 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 CRYM-AS1A6NIL9 109 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 IFNA21P01568 189 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 NKX2-1P43699 371 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-204ENST00000469207 LGALS9BQ3B8N2 356 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 NMSQ5H8A3 153 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 FAM222AQ5U5X8 452 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 GPR107Q5VW38 600 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 ETFRF1Q6IPR1 90 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 LYZL2Q7Z4W2 148 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 ZNF575Q86XF7 245 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 C1orf158Q8N1D5 194 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 RNF125Q96EQ8 232 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 NEU1Q99519 415 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 RBKSQ9H477 322 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 SAV1Q9H4B6 383 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-204ENST00000469207 SEPSECSQ9HD40 501 aaKnown RBP8.72□□□□□ -1.01
HDAC3-204ENST00000469207 DKK2Q9UBU2 259 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 TMEM56-RWDD3S4R434 201 aa8.72□□□□□ -1.01
HDAC3-204ENST00000469207 GABARAPH6UMI1 98 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 B3GALNT1O75752 331 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 GABARAPO95166 117 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 OR2F1Q13607 317 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 KLF9Q13886 244 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-204ENST00000469207 GAMTQ14353 236 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 Q6ZR54 194 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 UBE2DNLQ8IWF7 75 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 OR4C16Q8NGL9 310 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 C20orf173Q96LM9 149 aa8.71□□□□□ -1.02
HDAC3-204ENST00000469207 DISC1C4P0D8 188 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 SOCS3O14543 225 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 RGS5O15539 181 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 SULT1A3P0DMM9 295 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 SULT1A4P0DMN0 295 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 FAM78BQ5VT40 261 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 LGI3Q8N145 548 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 OR51S1Q8NGJ8 323 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 AP3S1Q92572 193 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 C17orf77Q96MU5 243 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 NIPSNAP3BQ9BS92 247 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 YTHDF2Q9Y5A9 579 aaKnown RBP8.7□□□□□ -1.02
HDAC3-204ENST00000469207 RFNGQ9Y644 331 aa8.7□□□□□ -1.02
HDAC3-204ENST00000469207 SMIM9A6NGZ8 99 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 ZFP92A6NM28 416 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 GSTZ1O43708 216 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-204ENST00000469207 LYZP61626 148 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 IGFL4Q6B9Z1 124 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 FOXI2Q6ZQN5 318 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 DTD1Q8TEA8 209 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 U3KQ87 197 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 LRP1BQ9NZR2 4599 aa8.69□□□□□ -1.02
HDAC3-204ENST00000469207 LOC102723971A0A1B0GUV8 181 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 TMEM189A5PLL7 270 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 AKAIN1P0CW23 69 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 SMIM18P0DKX4 95 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 PRB4P10163 310 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-204ENST00000469207 AKR1C4P17516 323 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 ID1P41134 155 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 SUPT4H1P63272 117 aaKnown RBP8.68□□□□□ -1.02
HDAC3-204ENST00000469207 PSG9Q00887 426 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 SPCS2Q15005 226 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 SURF2Q15527 256 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-204ENST00000469207 ZNF79Q15937 498 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 TMEM88Q6PEY1 159 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 CLVS1Q8IUQ0 354 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-204ENST00000469207 COQ8AQ8NI60 647 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 C7orf50Q9BRJ6 194 aaKnown RBP8.68□□□□□ -1.02
HDAC3-204ENST00000469207 HSPB7Q9UBY9 170 aa8.68□□□□□ -1.02
HDAC3-204ENST00000469207 IGKV1OR2-108A0A075B7D4 117 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 A0A0J9YX75 114 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 NACAE9PAV3 2078 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 HBE1P02100 147 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 GATA2P23769 480 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms