RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 IGLV2-23P01705 113 aa12.71□□□□□ -0.37
TSPAN4-211ENST00000468468 REG1AP05451 166 aa12.71□□□□□ -0.37
TSPAN4-211ENST00000468468 SAP30LQ9HAJ7 183 aa12.71□□□□□ -0.37
TSPAN4-211ENST00000468468 LOC102724200A0A096LPH7 203 aaPredicted RBP12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 NDUFB3O43676 98 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 SLAQ13239 276 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 PRR27Q6MZM9 219 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 NUDT10Q8NFP7 164 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 FXYD5Q96DB9 178 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 NUDT11Q96G61 164 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 GSX1Q9H4S2 264 aaPredicted RBP12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 WASHC3Q9Y3C0 194 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 ROS1P08922 2347 aa12.71□□□□□ -0.38
TSPAN4-211ENST00000468468 TMEM178BH3BS89 294 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 SLC25A17O43808 307 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 THBDP07204 575 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 UBE2V1Q13404 147 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 THAP8Q8NA92 274 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 OR4B1Q8NGF8 309 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 MBD6Q96DN6 1003 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 ZNF835Q9Y2P0 537 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 KALRNO60229 2985 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 TLN1Q9Y490 2541 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 MFAP2P55001 183 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 GNG5P63218 68 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 TSKUQ8WUA8 353 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 GRAMD2BQ96HH9 432 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 TPSG1Q9NRR2 321 aa12.7□□□□□ -0.38
TSPAN4-211ENST00000468468 FSTL3O95633 263 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 ORAOV1Q8WV07 137 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 ST6GALNAC6Q969X2 333 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 RITA1Q96K30 269 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 A0A1W2PPI3 338 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 NTF3P20783 257 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 NHLH1Q02575 133 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 FAM71F2Q6NXP2 309 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 NIT1Q86X76 327 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 LINC00311Q8N616 119 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 MSRB2Q9Y3D2 182 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 ORM2P19652 201 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 HINT1P49773 126 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 C18orf32Q8TCD1 76 aa12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 WIPF2Q8TF74 440 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-211ENST00000468468 IGF2RP11717 2491 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 MOSP00540 346 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 C3orf79P0CE67 100 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 RASL11AQ6T310 242 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 LHFPL4Q7Z7J7 247 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 ZNF596Q8TC21 504 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 BLNKQ8WV28 456 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 RELNP78509 3460 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 PRRX1P54821 245 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 UBE2G1P62253 170 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 SPATA45Q537H7 98 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 GDF5OSQ5U4N7 250 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 RUSC1-AS1Q66K80 236 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 HCP5Q6MZN7 132 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 OR1B1Q8NGR6 318 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 SGK494Q96LW2 274 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 TNFRSF19Q9NS68 423 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 JKAMPQ9P055 326 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 CTSZQ9UBR2 303 aa12.68□□□□□ -0.38
TSPAN4-211ENST00000468468 IGHV3-72A0A0B4J1Y9 119 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 SLC25A5P05141 298 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 Q6ZN92 141 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 C8orf31Q8N9H6 132 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 OR4C5Q8NGB2 326 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 LAMTOR2Q9Y2Q5 125 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 C22orf46C9J442 243 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 CORTO00230 105 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 TNFRSF13BO14836 293 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 MYCNOSP40205 109 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 CTRLP40313 264 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 ZNF841Q6ZN19 808 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 BORCS7Q96B45 105 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 PERPQ96FX8 193 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 TXN2Q99757 166 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 CHRDL1Q9BU40 450 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 RPH3ALQ9UNE2 315 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 RAXQ9Y2V3 346 aa12.67□□□□□ -0.38
TSPAN4-211ENST00000468468 PGPA6NDG6 321 aa12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 LOXP28300 417 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 MC5RP33032 325 aa12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 MRPL27Q9P0M9 148 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 HIST1H1EP10412 219 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 MRGPRG-AS1Q2M3A8 158 aa12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 C19orf35Q6ZS72 473 aa12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 SMIM15Q7Z3B0 74 aa12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 ZZEF1O43149 2961 aa12.66□□□□□ -0.38
TSPAN4-211ENST00000468468 HIGD1CA8MV81 97 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 PPBPP02775 128 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms