RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SULT1A2P50226 295 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 Q8N9W7 124 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 WDR61Q9GZS3 305 aaKnown RBP6.55□□□□□ -1.36
BRCA1-208ENST00000468300 CACFD1Q9UGQ2 172 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 LGALS4P56470 323 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 CD81P60033 236 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 MLANAQ16655 118 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 C2orf83Q53S99 150 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 ASPHD1Q5U4P2 390 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 CENPVQ7Z7K6 275 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-208ENST00000468300 OR10D4PQ8NGN7 298 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 OR1L8Q8NGR8 309 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 OR2T10Q8NGZ9 312 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 PTH2Q96A98 100 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 CLCC1Q96S66 551 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 HEYLQ9NQ87 328 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-208ENST00000468300 NAV3Q8IVL0 2385 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 GATA3P23771 443 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 NDPQ00604 133 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 ZNF266Q14584 549 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 PRR27Q6MZM9 219 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 P2RX4Q99571 388 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 RSG1Q9BU20 258 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 PLEKHA3Q9HB20 300 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 OTOGQ6ZRI0 2925 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 NAV2Q8IVL1 2488 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 AP4M1O00189 453 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 AMY1AP04745 511 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 FGF7P21781 194 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 KRTAP1-1Q07627 177 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 MMDQ15546 238 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 PSG3Q16557 428 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 MMD2Q8IY49 270 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 OR9G4Q8NGQ1 327 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 OR1L4Q8NGR5 311 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 COMMD5Q9GZQ3 224 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 VSIRQ9H7M9 311 aa6.54□□□□□ -1.36
BRCA1-208ENST00000468300 BORCS7-ASMTA0A0B4J1R7 106 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 REG1AP05451 166 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 NPY1RP25929 384 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 HBG1P69891 147 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 HBG2P69892 147 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 TREML4Q6UXN2 200 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 OR10P1Q8NGE3 313 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 MED9Q9NWA0 146 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 LSM4Q9Y4Z0 139 aaKnown RBP6.53□□□□□ -1.36
BRCA1-208ENST00000468300 IGKV1OR2-108A0A075B7D4 117 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 UBE2L5PA0A1B0GUS4 154 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 TMEM218A2RU14 115 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 SCGB1A1P11684 91 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 CNN1P51911 297 aaKnown RBP6.53□□□□□ -1.36
BRCA1-208ENST00000468300 BCL6BQ8N143 479 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-208ENST00000468300 TAF15Q92804 592 aaKnown RBP eCLIP6.53□□□□□ -1.366e-6■□□□□ 11.2
BRCA1-208ENST00000468300 HRH4Q9H3N8 390 aa6.53□□□□□ -1.36
BRCA1-208ENST00000468300 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-208ENST00000468300 BTNL8Q6UX41 500 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 MTURNQ8N3F0 131 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 NECAP1Q8NC96 275 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 RNF141Q8WVD5 230 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 SRSF12Q8WXF0 261 aaKnown RBP6.52□□□□□ -1.36
BRCA1-208ENST00000468300 FOXC2Q99958 501 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 HSPB9Q9BQS6 159 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 TMEM147Q9BVK8 224 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 CST9LQ9H4G1 147 aa6.52□□□□□ -1.36
BRCA1-208ENST00000468300 MRPL36Q9P0J6 103 aaKnown RBP6.52□□□□□ -1.36
BRCA1-208ENST00000468300 IGHV7-81A0A0B4J1V7 117 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 MDFIC2A0A1B0GVS7 189 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 J3QLI3 93 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 APELAP0DMC3 54 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 SRD5A3Q9H8P0 318 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 WDR83OSQ9Y284 106 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 A0A1B0GUS0 222 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 LINC01548A6NM66 108 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
BRCA1-208ENST00000468300 GNB1P62873 340 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 EIF5AP63241 154 aaKnown RBP6.52□□□□□ -1.37
BRCA1-208ENST00000468300 DLK1P80370 383 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 HES1Q14469 280 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 ZNF726P1Q15940 193 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 FAM110DQ8TAY7 271 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-208ENST00000468300 MGST2Q99735 147 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 SCRT1Q9BWW7 348 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 MAP1LC3CQ9BXW4 147 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 NPCDR1Q9BY65 106 aa6.52□□□□□ -1.37
BRCA1-208ENST00000468300 FAM106CPP0CH98 169 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 OR13C7P0DN81 318 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 RPL29P47914 159 aaKnown RBP6.51□□□□□ -1.37
BRCA1-208ENST00000468300 CX3CL1P78423 397 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 ACSM6Q6P461 480 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 C5orf56Q8N8D9 126 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 OR2G3Q8NGZ4 309 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 PSMG3Q9BT73 122 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-208ENST00000468300 FAM103A1Q9BTL3 118 aaKnown RBP6.51□□□□□ -1.37
BRCA1-208ENST00000468300 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 K7EN84 100 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 SSMEM1Q8WWF3 244 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 JMJD8Q96S16 334 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms