RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CCR6P51684 374 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 SMCO1Q147U7 214 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 SIGLEC15Q6ZMC9 328 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 DTD1Q8TEA8 209 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 SLIRPQ9GZT3 109 aaKnown RBP17.68■□□□□ 0.42
PTCH1-210ENST00000468211 NRN1Q9NPD7 142 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 SHPKQ9UHJ6 478 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 SCP2D1Q9UJQ7 156 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 TBC1D24Q9ULP9 559 aa17.68■□□□□ 0.42
PTCH1-210ENST00000468211 C11orf94C9JXX5 98 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 TNFSF8P32971 234 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 TMBIM6P55061 237 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 TCTAP57738 103 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 NOXA1Q86UR1 476 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 LGI3Q8N145 548 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 RSL24D1Q9UHA3 163 aaKnown RBP17.67■□□□□ 0.42
PTCH1-210ENST00000468211 CELA1Q9UNI1 258 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 U3KQ87 197 aa17.67■□□□□ 0.42
PTCH1-210ENST00000468211 DEFB1P60022 68 aa17.66■□□□□ 0.42
PTCH1-210ENST00000468211 HECTD4Q9Y4D8 3996 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 IGKV1D-37A0A075B6S9 117 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 H3BMM0 161 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 ZNF90Q03938 601 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 KLF9Q13886 244 aaPredicted RBP17.65■□□□□ 0.42
PTCH1-210ENST00000468211 GSG1LQ6UXU4 331 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 RNF125Q96EQ8 232 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 SCGB3A2Q96PL1 93 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 XCL2Q9UBD3 114 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 CACFD1Q9UGQ2 172 aa17.65■□□□□ 0.42
PTCH1-210ENST00000468211 SNRPD3P62318 126 aaKnown RBP17.64■□□□□ 0.41
PTCH1-210ENST00000468211 GAMTQ14353 236 aa17.64■□□□□ 0.41
PTCH1-210ENST00000468211 GDF5OSQ5U4N7 250 aa17.64■□□□□ 0.41
PTCH1-210ENST00000468211 ZNF767PQ75MW2 155 aa17.64■□□□□ 0.41
PTCH1-210ENST00000468211 BCL7BQ9BQE9 202 aa17.64■□□□□ 0.41
PTCH1-210ENST00000468211 PBDC1Q9BVG4 233 aa17.64■□□□□ 0.41
PTCH1-210ENST00000468211 SEPSECSQ9HD40 501 aaKnown RBP17.64■□□□□ 0.41
PTCH1-210ENST00000468211 FABP12A6NFH5 140 aa17.63■□□□□ 0.41
PTCH1-210ENST00000468211 H3BMQ9 156 aa17.63■□□□□ 0.41
PTCH1-210ENST00000468211 WDR12Q9GZL7 423 aaKnown RBP17.63■□□□□ 0.41
PTCH1-210ENST00000468211 TRAV10A0A0B4J240 114 aa17.62■□□□□ 0.41
PTCH1-210ENST00000468211 C12orf74Q32Q52 190 aa17.62■□□□□ 0.41
PTCH1-210ENST00000468211 OR1S1Q8NH92 325 aa17.62■□□□□ 0.41
PTCH1-210ENST00000468211 IGHV4-4A0A075B6R2 117 aa17.61■□□□□ 0.41
PTCH1-210ENST00000468211 ZFP92A6NM28 416 aa17.61■□□□□ 0.41
PTCH1-210ENST00000468211 PITX3O75364 302 aa17.61■□□□□ 0.41
PTCH1-210ENST00000468211 HLA-DRB4P13762 266 aa17.61■□□□□ 0.41
PTCH1-210ENST00000468211 SCRT1Q9BWW7 348 aa17.61■□□□□ 0.41
PTCH1-210ENST00000468211 HLA-DRB4X5D2U9 266 aa17.61■□□□□ 0.41
PTCH1-210ENST00000468211 HERC2O95714 4834 aa17.6■□□□□ 0.41
PTCH1-210ENST00000468211 GPX4P36969 197 aaPredicted RBP17.6■□□□□ 0.41
PTCH1-210ENST00000468211 TMED4Q7Z7H5 227 aa17.6■□□□□ 0.41
PTCH1-210ENST00000468211 MCFD2Q8NI22 146 aa17.6■□□□□ 0.41
PTCH1-210ENST00000468211 TRIM63Q969Q1 353 aa17.6■□□□□ 0.41
PTCH1-210ENST00000468211 IGKV3-20P01619 116 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 IAPPP10997 89 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 ANXA3P12429 323 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 NKX2-1P43699 371 aaPredicted RBP17.59■□□□□ 0.41
PTCH1-210ENST00000468211 SRPXP78539 464 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 OR2F1Q13607 317 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 OR8G2PQ6IF36 304 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 SLC35E1Q96K37 410 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 C1QTNF4Q9BXJ3 329 aa17.59■□□□□ 0.41
PTCH1-210ENST00000468211 IGKV1OR2-108A0A075B7D4 117 aa17.58■□□□□ 0.4
PTCH1-210ENST00000468211 SOCS3O14543 225 aa17.58■□□□□ 0.4
PTCH1-210ENST00000468211 ATP5IP56385 69 aaPredicted RBP17.58■□□□□ 0.4
PTCH1-210ENST00000468211 FXYD7P58549 80 aa17.58■□□□□ 0.4
PTCH1-210ENST00000468211 NUTF2P61970 127 aaKnown RBP17.58■□□□□ 0.4
PTCH1-210ENST00000468211 LINC00052Q96N35 136 aa17.58■□□□□ 0.4
PTCH1-210ENST00000468211 LYZP61626 148 aa17.57■□□□□ 0.4
PTCH1-210ENST00000468211 ZNF705AQ6ZN79 300 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-210ENST00000468211 NUP62P37198 522 aaPredicted RBP17.56■□□□□ 0.4
PTCH1-210ENST00000468211 TMEM128Q5BJH2 165 aa17.56■□□□□ 0.4
PTCH1-210ENST00000468211 RNF126Q9BV68 326 aa17.56■□□□□ 0.4
PTCH1-210ENST00000468211 KRTAP17-1Q9BYP8 105 aa17.56■□□□□ 0.4
PTCH1-210ENST00000468211 SAV1Q9H4B6 383 aaPredicted RBP17.56■□□□□ 0.4
PTCH1-210ENST00000468211 V9GYH0 126 aa17.56■□□□□ 0.4
PTCH1-210ENST00000468211 DEFB131BA0A096LNP1 70 aa17.55■□□□□ 0.4
PTCH1-210ENST00000468211 CENPSQ8N2Z9 138 aa17.55■□□□□ 0.4
PTCH1-210ENST00000468211 LRTM2Q8N967 370 aa17.55■□□□□ 0.4
PTCH1-210ENST00000468211 DUXBA0A1W2PPF3 345 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 ZNF705FA8MVS1 300 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-210ENST00000468211 ZNF705DP0CH99 300 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-210ENST00000468211 ZNF705BP0CI00 300 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-210ENST00000468211 VAMP1P23763 118 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 ZNF79Q15937 498 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 PYDC2Q56P42 97 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 C1orf194Q5T5A4 169 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 ZNF709Q8N972 641 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 THAP8Q8NA92 274 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 TRGV9Q99603 122 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 MAGT1Q9H0U3 335 aa17.54■□□□□ 0.4
PTCH1-210ENST00000468211 PAIP2BQ9ULR5 123 aaKnown RBP17.54■□□□□ 0.4
PTCH1-210ENST00000468211 SNRPGP15A8MWD9 76 aa17.53■□□□□ 0.4
PTCH1-210ENST00000468211 NOL3O60936 208 aaKnown RBP17.53■□□□□ 0.4
PTCH1-210ENST00000468211 AMBPP02760 352 aa17.53■□□□□ 0.4
PTCH1-210ENST00000468211 FAUP35544 74 aaKnown RBP17.53■□□□□ 0.4
PTCH1-210ENST00000468211 PSMB3P49720 205 aa17.53■□□□□ 0.4
PTCH1-210ENST00000468211 FOXI2Q6ZQN5 318 aa17.53■□□□□ 0.4
PTCH1-210ENST00000468211 TOMM5Q8N4H5 51 aa17.53■□□□□ 0.4
PTCH1-210ENST00000468211 NEU1Q99519 415 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms