RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 PMS2P11Q13670 270 aa16.06■□□□□ 0.16
TMEM53-207ENST00000468117 KHDC3LQ587J8 217 aa16.06■□□□□ 0.16
TMEM53-207ENST00000468117 VN1R17PQ8TDU5 208 aa16.06■□□□□ 0.16
TMEM53-207ENST00000468117 RD3LP0DJH9 198 aa16.05■□□□□ 0.16
TMEM53-207ENST00000468117 PPIFP30405 207 aaKnown RBP16.05■□□□□ 0.16
TMEM53-207ENST00000468117 RBMS3Q6XE24 437 aaKnown RBP16.05■□□□□ 0.16
TMEM53-207ENST00000468117 SLC35B3Q9H1N7 401 aa16.05■□□□□ 0.16
TMEM53-207ENST00000468117 SMDT1Q9H4I9 107 aa16.05■□□□□ 0.16
TMEM53-207ENST00000468117 TRAV30A0A087WSZ9 112 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 TRAV5A0A0B4J249 113 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 PSMB3P49720 205 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 SEC11CQ9BY50 192 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 MRPL32Q9BYC8 188 aaKnown RBP16.04■□□□□ 0.16
TMEM53-207ENST00000468117 LYZP61626 148 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 LINC00305Q7Z4B0 112 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 ZNF502Q8TBZ5 544 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 RNF2Q99496 336 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 SMR3AQ99954 134 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 TECRQ9NZ01 308 aaKnown RBP16.04■□□□□ 0.16
TMEM53-207ENST00000468117 VAX2Q9UIW0 290 aa16.04■□□□□ 0.16
TMEM53-207ENST00000468117 NF1P21359 2839 aa16.03■□□□□ 0.16
TMEM53-207ENST00000468117 ELOA3CA0A087WX78 387 aaPredicted RBP16.03■□□□□ 0.16
TMEM53-207ENST00000468117 PAGE4O60829 102 aa16.03■□□□□ 0.16
TMEM53-207ENST00000468117 HSPB1P04792 205 aaKnown RBP16.03■□□□□ 0.16
TMEM53-207ENST00000468117 SRP19P09132 144 aaKnown RBP16.03■□□□□ 0.16
TMEM53-207ENST00000468117 GCHFRP30047 84 aa16.03■□□□□ 0.16
TMEM53-207ENST00000468117 C10orf91Q5T1B1 145 aa16.03■□□□□ 0.16
TMEM53-207ENST00000468117 MANBALQ9NQG1 85 aa16.03■□□□□ 0.16
TMEM53-207ENST00000468117 OR7C2O60412 319 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 HYPMO75409 117 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 TOMM40O96008 361 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 TRGV3P03979 118 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 FABP1P07148 127 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 CTSGP08311 255 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 C8orf88P0DMB2 117 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 CEBPGP53567 150 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 PLP1P60201 277 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 UBE2G2P60604 165 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 OR51G1Q8NGK1 321 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 ZNF503Q96F45 646 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 TXN2Q99757 166 aa16.02■□□□□ 0.16
TMEM53-207ENST00000468117 FCGR2BP31994 310 aaPredicted RBP16.02■□□□□ 0.15
TMEM53-207ENST00000468117 GPR183P32249 361 aa16.02■□□□□ 0.15
TMEM53-207ENST00000468117 TAS2R45P59539 299 aa16.02■□□□□ 0.15
TMEM53-207ENST00000468117 MEF2BQ02080 365 aaPredicted RBP16.02■□□□□ 0.15
TMEM53-207ENST00000468117 CYB561D1Q8N8Q1 229 aa16.02■□□□□ 0.15
TMEM53-207ENST00000468117 FAM167A-AS1Q96KT0 104 aa16.02■□□□□ 0.15
TMEM53-207ENST00000468117 CHRDL1Q9BU40 450 aa16.02■□□□□ 0.15
TMEM53-207ENST00000468117 SLC25A2Q9BXI2 301 aa16.02■□□□□ 0.15
TMEM53-207ENST00000468117 YPEL3P61236 119 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-207ENST00000468117 GUCA2BQ16661 112 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 CCDC140Q96MF4 163 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 CARHSP1Q9Y2V2 147 aaKnown RBP16.01■□□□□ 0.15
TMEM53-207ENST00000468117 IL4P05112 153 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 CLEC3BP05452 202 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 ADMP35318 185 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 TPPP2P59282 170 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 CD81P60033 236 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 ATP5G2Q06055 141 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 PQLC2Q6ZP29 291 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 ZNF491Q8N8L2 437 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 OR5AU1Q8NGC0 362 aa16.01■□□□□ 0.15
TMEM53-207ENST00000468117 OR10J4P0C629 311 aa16■□□□□ 0.15
TMEM53-207ENST00000468117 KIAA0141Q14154 515 aaPredicted RBP16■□□□□ 0.15
TMEM53-207ENST00000468117 CLEC19AQ6UXS0 136 aa16■□□□□ 0.15
TMEM53-207ENST00000468117 CCDC28AQ8IWP9 274 aa16■□□□□ 0.15
TMEM53-207ENST00000468117 EEF1AKMT3Q96AZ1 226 aa16■□□□□ 0.15
TMEM53-207ENST00000468117 HIVEP2P31629 2446 aa16■□□□□ 0.15
TMEM53-207ENST00000468117 FAM223BA6NKX1 122 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 SCO1O75880 301 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 PF4V1P10720 104 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 HNF1AP20823 631 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 CFHR3Q02985 330 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 ZNF329Q86UD4 541 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 FAM223AQ8IWN6 122 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 RNF125Q96EQ8 232 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 PRSS22Q9GZN4 317 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 NPFFR1Q9GZQ6 430 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 KLK15Q9H2R5 256 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 HIGD1AQ9Y241 93 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 NUPL2O15504 423 aaKnown RBP15.99■□□□□ 0.15
TMEM53-207ENST00000468117 IGLV1-40P01703 118 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 SOHLH1Q5JUK2 328 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 CST9LP1Q5W188 147 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 LEMD1Q68G75 181 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 LCNL1Q6ZST4 164 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 Q8WTZ3 238 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 ZNF702PQ9H963 129 aa15.99■□□□□ 0.15
TMEM53-207ENST00000468117 TRBV7-1A0A0A6YYK4 115 aa15.98■□□□□ 0.15
TMEM53-207ENST00000468117 IGHV3-35A0A0C4DH35 117 aa15.98■□□□□ 0.15
TMEM53-207ENST00000468117 H3BUA1 57 aa15.98■□□□□ 0.15
TMEM53-207ENST00000468117 PYYP10082 97 aa15.98■□□□□ 0.15
TMEM53-207ENST00000468117 TAGLN2P37802 199 aaKnown RBP15.98■□□□□ 0.15
TMEM53-207ENST00000468117 OR4F5Q8NH21 305 aa15.98■□□□□ 0.15
TMEM53-207ENST00000468117 OR4F4Q96R69 305 aa15.98■□□□□ 0.15
TMEM53-207ENST00000468117 MRPL27Q9P0M9 148 aaKnown RBP15.98■□□□□ 0.15
TMEM53-207ENST00000468117 ZNF580Q9UK33 172 aa15.98■□□□□ 0.15
TMEM53-207ENST00000468117 WI2-2373I1.2A0A1W2PRP0 233 aa15.97■□□□□ 0.15
TMEM53-207ENST00000468117 C11orf94C9JXX5 98 aa15.97■□□□□ 0.15
TMEM53-207ENST00000468117 SCGB2A1O75556 95 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms