RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 FGF20Q9NP95 211 aaPredicted RBP7.65□□□□□ -1.18
VPS26A-204ENST00000467852 RCL1Q9Y2P8 373 aaKnown RBP7.65□□□□□ -1.18
VPS26A-204ENST00000467852 TRAV12-2A0A075B6T6 113 aa7.64□□□□□ -1.19
VPS26A-204ENST00000467852 TCRBV3S1A0A5B6 114 aa7.64□□□□□ -1.19
VPS26A-204ENST00000467852 GADD45AP24522 165 aa7.64□□□□□ -1.19
VPS26A-204ENST00000467852 OR4X1Q8NH49 305 aa7.64□□□□□ -1.19
VPS26A-204ENST00000467852 RNASE8Q8TDE3 154 aaKnown RBP7.64□□□□□ -1.19
VPS26A-204ENST00000467852 PHYHIPQ92561 330 aa7.64□□□□□ -1.19
VPS26A-204ENST00000467852 PLGRKTQ9HBL7 147 aa7.64□□□□□ -1.19
VPS26A-204ENST00000467852 ISLRO14498 428 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 DUSP14O95147 198 aaKnown RBP7.63□□□□□ -1.19
VPS26A-204ENST00000467852 KRASP01116 189 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 IGKV1-17P01599 117 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 GABRB1P18505 474 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 SNCAP37840 140 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 ARPC4P59998 168 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 FLOT2Q14254 428 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 NEGR1Q7Z3B1 354 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 BPIFB6Q8NFQ5 453 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 OR51H1Q8NH63 302 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 LINC01600Q96MT4 127 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 TSC22D3Q99576 134 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 Q9HAA7 133 aa7.63□□□□□ -1.19
VPS26A-204ENST00000467852 RBFOX3A6NFN3 312 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 SNURFLB1AK76 121 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 CORTO00230 105 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 IL4P05112 153 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 MYL12AP19105 171 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
VPS26A-204ENST00000467852 AADACL3Q5VUY0 350 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 CNIH2Q6PI25 160 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 ORC6Q9Y5N6 252 aa7.62□□□□□ -1.19
VPS26A-204ENST00000467852 SOCS3O14543 225 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 ZNF182P17025 639 aaPredicted RBP7.61□□□□□ -1.19
VPS26A-204ENST00000467852 DTYMKP23919 212 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 G6PCP35575 357 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 NUP62P37198 522 aaPredicted RBP7.61□□□□□ -1.19
VPS26A-204ENST00000467852 CNN1P51911 297 aaKnown RBP7.61□□□□□ -1.19
VPS26A-204ENST00000467852 DHODHQ02127 395 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 ZIK1Q3SY52 487 aaPredicted RBP7.61□□□□□ -1.19
VPS26A-204ENST00000467852 SAMD13Q5VXD3 122 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 TEPPQ6URK8 271 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 CCDC28AQ8IWP9 274 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 TSPAN14Q8NG11 270 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 OR10R2Q8NGX6 335 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 OR6F1Q8NGZ6 308 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 GPR146Q96CH1 333 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 TM2D2Q9BX73 214 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 MRPL36Q9P0J6 103 aaKnown RBP7.61□□□□□ -1.19
VPS26A-204ENST00000467852 DAPK2Q9UIK4 370 aa7.61□□□□□ -1.19
VPS26A-204ENST00000467852 TRGV2A0A075B6R0 118 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 IBA57-AS1B1ANH7 110 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 SLC17A2O00624 439 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 ZNF324O75467 553 aaPredicted RBP7.6□□□□□ -1.19
VPS26A-204ENST00000467852 CD1AP06126 327 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 HIST1H1DP16402 221 aaKnown RBP7.6□□□□□ -1.19
VPS26A-204ENST00000467852 PI3P19957 117 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 OPRK1P41145 380 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 RANBP1P43487 201 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 SUB1P53999 127 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS26A-204ENST00000467852 GAMTQ14353 236 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 WFDC2Q14508 124 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 C2orf76Q3KRA6 126 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 MORN5Q5VZ52 161 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 AMIGO2Q86SJ2 522 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 OR1S2Q8NGQ3 325 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 OR52E5Q8NH55 327 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 OR4A16Q8NH70 328 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 RHOXF1Q8NHV9 184 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 CHAC2Q8WUX2 184 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 SLC7A6OSQ96CW6 309 aaPredicted RBP7.6□□□□□ -1.19
VPS26A-204ENST00000467852 RAB22AQ9UL26 194 aa7.6□□□□□ -1.19
VPS26A-204ENST00000467852 BOLA2-SMG1P6H3BVE0 249 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 LECT2O14960 151 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 TNFSF8P32971 234 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 LPAR6P43657 344 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 YPEL3P61236 119 aaPredicted RBP7.59□□□□□ -1.19
VPS26A-204ENST00000467852 INSL4Q14641 139 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 HES5Q5TA89 166 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 FAM3DQ96BQ1 224 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 C16orf92Q96LL3 132 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 SLC5A7Q9GZV3 580 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 PPP1R14DQ9NXH3 145 aa7.59□□□□□ -1.19
VPS26A-204ENST00000467852 IRGMA1A4Y4 181 aa7.58□□□□□ -1.2
VPS26A-204ENST00000467852 C9JCJ5 164 aa7.58□□□□□ -1.2
VPS26A-204ENST00000467852 F2RP25116 425 aa7.58□□□□□ -1.2
VPS26A-204ENST00000467852 HSPE1P61604 102 aaKnown RBP7.58□□□□□ -1.2
VPS26A-204ENST00000467852 HSD17B12Q53GQ0 312 aa7.58□□□□□ -1.2
VPS26A-204ENST00000467852 HACD4Q5VWC8 232 aa7.58□□□□□ -1.2
VPS26A-204ENST00000467852 C20orf173Q96LM9 149 aa7.58□□□□□ -1.2
VPS26A-204ENST00000467852 SLC25A39Q9BZJ4 359 aaPredicted RBP7.58□□□□□ -1.2
VPS26A-204ENST00000467852 A0A0D9SG52 128 aa7.57□□□□□ -1.2
VPS26A-204ENST00000467852 TMEM272A0A1B0GTI8 110 aa7.57□□□□□ -1.2
VPS26A-204ENST00000467852 H7BYZ3 331 aa7.57□□□□□ -1.2
VPS26A-204ENST00000467852 FCGR2CP31995 323 aa7.57□□□□□ -1.2
VPS26A-204ENST00000467852 CLDN12P56749 244 aa7.57□□□□□ -1.2
VPS26A-204ENST00000467852 SMN1Q16637 294 aaKnown RBP7.57□□□□□ -1.2
VPS26A-204ENST00000467852 Q6ZTI0 123 aa7.57□□□□□ -1.2
VPS26A-204ENST00000467852 FCAMRQ8WWV6 532 aa7.57□□□□□ -1.2
VPS26A-204ENST00000467852 DIMT1Q9UNQ2 313 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms