RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 NMSQ5H8A3 153 aa12.4□□□□□ -0.42
TRIM56-203ENST00000467847 NDUFAF3Q9BU61 184 aa12.4□□□□□ -0.42
TRIM56-203ENST00000467847 GPR132Q9UNW8 380 aa12.4□□□□□ -0.42
TRIM56-203ENST00000467847 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
TRIM56-203ENST00000467847 HLA-DRB4X5D2U9 266 aa12.4□□□□□ -0.42
TRIM56-203ENST00000467847 PKHD1P08F94 4074 aa12.4□□□□□ -0.42
TRIM56-203ENST00000467847 AKAIN1P0CW23 69 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 NKX2-1P43699 371 aaPredicted RBP12.39□□□□□ -0.43
TRIM56-203ENST00000467847 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 OR51G1Q8NGK1 321 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 OR4C16Q8NGL9 310 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 SMIM4Q8WVI0 70 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 RNF125Q96EQ8 232 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 PBDC1Q9BVG4 233 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 SCRT1Q9BWW7 348 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 DNAH2Q9P225 4427 aa12.39□□□□□ -0.43
TRIM56-203ENST00000467847 IGKV3-20P01619 116 aa12.38□□□□□ -0.43
TRIM56-203ENST00000467847 NUP62P37198 522 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-203ENST00000467847 PRRT1Q99946 306 aa12.38□□□□□ -0.43
TRIM56-203ENST00000467847 PRR13Q9NZ81 148 aa12.38□□□□□ -0.43
TRIM56-203ENST00000467847 PFDN2Q9UHV9 154 aa12.38□□□□□ -0.43
TRIM56-203ENST00000467847 U3KQ87 197 aa12.38□□□□□ -0.43
TRIM56-203ENST00000467847 CTDSP2O14595 271 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 EMP1P54849 157 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 KLF9Q13886 244 aaPredicted RBP12.37□□□□□ -0.43
TRIM56-203ENST00000467847 GDF5OSQ5U4N7 250 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 ZNF705AQ6ZN79 300 aaPredicted RBP12.37□□□□□ -0.43
TRIM56-203ENST00000467847 LGI3Q8N145 548 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 LINC00052Q96N35 136 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 NEU1Q99519 415 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 KCNIP3Q9Y2W7 256 aa12.37□□□□□ -0.43
TRIM56-203ENST00000467847 IGHV3OR16-12A0A075B7B8 117 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 TMEM189A5PLL7 270 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 ZFP92A6NM28 416 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-203ENST00000467847 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-203ENST00000467847 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-203ENST00000467847 SPART-AS1P0CW21 52 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 SMIM18P0DKX4 95 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 CCR6P51684 374 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 FXYD7P58549 80 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 DEFB1P60022 68 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 IL18Q14116 193 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 OR8G2PQ6IF36 304 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 CLVS1Q8IUQ0 354 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-203ENST00000467847 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 WDR12Q9GZL7 423 aaKnown RBP12.36□□□□□ -0.43
TRIM56-203ENST00000467847 RBKSQ9H477 322 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 HSPB7Q9UBY9 170 aa12.36□□□□□ -0.43
TRIM56-203ENST00000467847 A0A1B0GVY2 172 aa12.35□□□□□ -0.43
TRIM56-203ENST00000467847 SMIM9A6NGZ8 99 aa12.35□□□□□ -0.43
TRIM56-203ENST00000467847 M0R2N4 97 aa12.35□□□□□ -0.43
TRIM56-203ENST00000467847 ID1P41134 155 aa12.35□□□□□ -0.43
TRIM56-203ENST00000467847 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
TRIM56-203ENST00000467847 COQ8AQ8NI60 647 aa12.35□□□□□ -0.43
TRIM56-203ENST00000467847 SAV1Q9H4B6 383 aaPredicted RBP12.35□□□□□ -0.43
TRIM56-203ENST00000467847 PRSS29PA6NIE9 313 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 CTDSPLO15194 276 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 PSMB3P49720 205 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 ZNF90Q03938 601 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 GAMTQ14353 236 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 FOXI2Q6ZQN5 318 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 OR4B1Q8NGF8 309 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 DIRAS2Q96HU8 199 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 SLC35E1Q96K37 410 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 SCP2D1Q9UJQ7 156 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 RFNGQ9Y644 331 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 DNAH17Q9UFH2 4485 aa12.34□□□□□ -0.43
TRIM56-203ENST00000467847 A0A0B4J2A0 478 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 RTL8CO15255 209 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 FABP1P07148 127 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 AKR1C4P17516 323 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 LYZP61626 148 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 SUPT4H1P63272 117 aaKnown RBP12.33□□□□□ -0.44
TRIM56-203ENST00000467847 SPCS2Q15005 226 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 ZNF709Q8N972 641 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 SCGB3A2Q96PL1 93 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 SHPKQ9UHJ6 478 aa12.33□□□□□ -0.44
TRIM56-203ENST00000467847 IGKV1D-37A0A075B6S9 117 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 TEX48A0A1B0GUV7 120 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 SOCS3O14543 225 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 IFNA21P01568 189 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 GPX4P36969 197 aaPredicted RBP12.32□□□□□ -0.44
TRIM56-203ENST00000467847 ATP5IP56385 69 aaPredicted RBP12.32□□□□□ -0.44
TRIM56-203ENST00000467847 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 GPR141Q7Z602 305 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 UBE2DNLQ8IWF7 75 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 OR1S1Q8NH92 325 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 PPP1R14BQ96C90 147 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 MCUBQ9NWR8 336 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 RABL2AQ9UBK7 228 aaPredicted RBP12.32□□□□□ -0.44
TRIM56-203ENST00000467847 DKK2Q9UBU2 259 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 RABL2BQ9UNT1 228 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 ABCA13Q86UQ4 5058 aa12.32□□□□□ -0.44
TRIM56-203ENST00000467847 ANXA3P12429 323 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms