RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SSR3Q9UNL2 185 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 SLC35A3Q9Y2D2 325 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 PCDH15Q96QU1 1955 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 BRWD1Q9NSI6 2320 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 FUOMA2VDF0 154 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 C2orf70A6NJV1 201 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 H7C1C5 153 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 M0R378 163 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 NDUFB3O43676 98 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 UBL3O95164 117 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 FABP1P07148 127 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 NFYBP25208 207 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 GLRXP35754 106 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 LCN6P62502 163 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 RHOGP84095 191 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 SPANXN5Q5MJ07 72 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 BCL2L15Q5TBC7 163 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 FMN1Q68DA7 1419 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 OR2T10Q8NGZ9 312 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 PRRT1Q99946 306 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
VPS13A-209ENST00000467124 MED13Q9UHV7 2174 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 C7orf71A4D174 169 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 BRS3P32247 399 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 INSL3P51460 131 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 POU6F1Q14863 301 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 ESRGQ1W209 222 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 TRIQKQ629K1 86 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 STX12Q86Y82 276 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 PHF13Q86YI8 300 aaPredicted RBP1.52□□□□□ -2.17
VPS13A-209ENST00000467124 CLECL1Q8IZS7 167 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 C3orf56Q8N813 242 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 LINC00301Q8NCQ3 95 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 OR5AC2Q9NZP5 309 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 KIF1BO60333 1816 aa1.52□□□□□ -2.17
VPS13A-209ENST00000467124 MYOFQ9NZM1 2061 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 EIF3AQ14152 1382 aaKnown RBP1.51□□□□□ -2.17
VPS13A-209ENST00000467124 ODAMA1E959 279 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 RIIAD1A6NNX1 92 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 TIMM17BO60830 172 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 UBE2BP63146 152 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 C10orf55Q5SWW7 151 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 C3orf33Q6P1S2 294 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 Q8IYB0 196 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 ZNF418Q8TF45 676 aaPredicted RBP1.51□□□□□ -2.17
VPS13A-209ENST00000467124 ZHX1-C8orf76Q96EF9 292 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 LYSMD1Q96S90 227 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 TMEM126AQ9H061 195 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 TRABDQ9H4I3 376 aa1.51□□□□□ -2.17
VPS13A-209ENST00000467124 LYRM2Q9NU23 88 aaPredicted RBP1.51□□□□□ -2.17
VPS13A-209ENST00000467124 CR1P17927 2039 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 DUXBA0A1W2PPF3 345 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 IGKV2-29A2NJV5 120 aaPredicted RBP1.5□□□□□ -2.17
VPS13A-209ENST00000467124 OR1I1O60431 355 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 LYZL6O75951 148 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 CXCL1P09341 107 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 ZNF93P35789 620 aaPredicted RBP1.5□□□□□ -2.17
VPS13A-209ENST00000467124 DYNLT3P51808 116 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 RAB4BP61018 213 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 STX19Q8N4C7 294 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 SELENOSQ9BQE4 189 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 SLC25A21Q9BQT8 299 aaPredicted RBP1.5□□□□□ -2.17
VPS13A-209ENST00000467124 OR2J1Q9GZK6 312 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 MIXL1Q9H2W2 232 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 RNF122Q9H9V4 155 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 ACER3Q9NUN7 267 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 HEATR5BQ9P2D3 2071 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 RIMBP3CA6NJZ7 1639 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 RIMBP3BA6NNM3 1639 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 RIMBP3Q9UFD9 1639 aa1.5□□□□□ -2.17
VPS13A-209ENST00000467124 STRCQ7RTU9 1775 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 MED12LQ86YW9 2145 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 TRIOBPQ9H2D6 2365 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 TRGV10A0A0A0MS01 117 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 C19orf84I3L1E1 186 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 K7ERJ3 54 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 PROSCO94903 275 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 PRB1P04280 392 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 CSN2P05814 226 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 CRHP06850 196 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 BAALC-AS2P0C853 105 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 RNASE3P12724 160 aaKnown RBP1.49□□□□□ -2.17
VPS13A-209ENST00000467124 MIFP14174 115 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 SERPINB1P30740 379 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 TMBIM6P55061 237 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 MSMO1Q15800 293 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 C22orf39Q6P5X5 142 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 OR2T35Q8NGX2 323 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 SFT2D1Q8WV19 159 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 DYDC1Q8WWB3 177 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 ZC2HC1AQ96GY0 325 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 NPCDR1Q9BY65 106 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 SH3BGRL3Q9H299 93 aa1.49□□□□□ -2.17
VPS13A-209ENST00000467124 NHP2Q9NX24 153 aaKnown RBP1.49□□□□□ -2.17
VPS13A-209ENST00000467124 SCN8AQ9UQD0 1980 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 COL4A1P02462 1669 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 TRBV6-8A0A0A6YYG3 113 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 AIPO00170 330 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 ARPP19P56211 112 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 TCTAP57738 103 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms