RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 RIC1Q4ADV7 1423 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 BCL2L15Q5TBC7 163 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 UHRF1BP1Q6BDS2 1440 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 DEFB128Q7Z7B8 93 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 CPAMD8Q8IZJ3 1885 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 C10orf126Q8N4M7 172 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 C9orf163Q8N9P6 203 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 OR4D11Q8NGI4 311 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 RNASE11Q8TAA1 199 aaKnown RBP0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 CANT1Q8WVQ1 401 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 AQP3Q92482 292 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 PLEKHB2Q96CS7 222 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 RMND5BQ96G75 393 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 YPEL2Q96QA6 119 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 OR2J1Q9GZK6 312 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 YIPF3Q9GZM5 350 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 NHP2Q9NX24 153 aaKnown RBP0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 LHFPL6Q9Y693 200 aa0.85□□□□□ -2.27
GTF3C3-209ENST00000466862 GLI3P10071 1580 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 MEIKINA0A087WXM9 373 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 TRGV10A0A0A0MS01 117 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 TRAV3A0A0B4J244 114 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 C7orf71A4D174 169 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 OR2T1O43869 369 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 PFDN1O60925 122 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 GGCTO75223 188 aaKnown RBP0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 TRGC2P03986 189 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 GPX1P07203 203 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 NBEAP1P0C6P0 100 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 OGNP20774 298 aaKnown RBP0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 FKBP2P26885 142 aaKnown RBP0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 S100GP29377 79 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 KRTAP12-1P59990 96 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 UBE2BP63146 152 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 RHOGP84095 191 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 KRTAP21-3Q3LHN1 58 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 SPANXN5Q5MJ07 72 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 FKBP1CQ5VVH2 108 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 SOSTDC1Q6X4U4 206 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 C7orf65Q6ZTY9 151 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 PDZD9Q8IXQ8 264 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 ST6GALNAC3Q8NDV1 305 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 NUP35Q8NFH5 326 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 GPX7Q96SL4 187 aaPredicted RBP0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 PRADC1Q9BSG0 188 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 MRPL32Q9BYC8 188 aaKnown RBP0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 TMEM106BQ9NUM4 274 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 MED11Q9P086 117 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 LAMTOR3Q9UHA4 124 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 OR52A1Q9UKL2 312 aa0.84□□□□□ -2.27
GTF3C3-209ENST00000466862 RIMBP3CA6NJZ7 1639 aa0.84□□□□□ -2.28
GTF3C3-209ENST00000466862 RIMBP3BA6NNM3 1639 aa0.84□□□□□ -2.28
GTF3C3-209ENST00000466862 SMARCA4P51532 1647 aa0.84□□□□□ -2.28
GTF3C3-209ENST00000466862 RIMBP3Q9UFD9 1639 aa0.84□□□□□ -2.28
GTF3C3-209ENST00000466862 MALRD1Q5VYJ5 2156 aa0.84□□□□□ -2.28
GTF3C3-209ENST00000466862 MYH3P11055 1940 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 DENND4CQ5VZ89 1909 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 TECPR2O15040 1411 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 CD109Q6YHK3 1445 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 SETD5Q9C0A6 1442 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 TRAV1-1A0A0B4J248 108 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 LOC105371267A0A1B0GV96 52 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 ODAMA1E959 279 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 TSTD3H0UI37 97 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 NDUFB3O43676 98 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 IFNA14P01570 189 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 CRPP02741 224 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 CXCL1P09341 107 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 MGST1P10620 155 aaKnown RBP0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 AKR1C3P42330 323 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 DYNLT3P51808 116 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 DYNLT1P63172 113 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 MYL5Q02045 173 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 ELOBQ15370 118 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 SURF2Q15527 256 aaPredicted RBP0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 Q1T7F1 81 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 BRMS1LQ5PSV4 323 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 SAMD13Q5VXD3 122 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 EIF5AL1Q6IS14 154 aaKnown RBP0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 C22orf39Q6P5X5 142 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 ZNF826PQ6ZT77 177 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 CROCCP2Q86T23 111 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 PHF13Q86YI8 300 aaPredicted RBP0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 C3orf56Q8N813 242 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 SLC30A7Q8NEW0 376 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 OR2T10Q8NGZ9 312 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 PPTC7Q8NI37 304 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 MBD3L1Q8WWY6 194 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 PYDC1Q8WXC3 89 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 ZC2HC1AQ96GY0 325 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 TEX37Q96LM6 180 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 CARD19Q96LW7 228 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 SLC50A1Q9BRV3 221 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 EFCAB11Q9BUY7 163 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 NPCDR1Q9BY65 106 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 TMEM126AQ9H061 195 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 POPDC3Q9HBV1 291 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 C19orf12Q9NSK7 152 aa0.83□□□□□ -2.28
GTF3C3-209ENST00000466862 TAS2R4Q9NYW5 299 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms