RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MBD3L1Q8WWY6 194 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 C22orf15Q8WYQ4 148 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 FAM103A1Q9BTL3 118 aaKnown RBP4.26□□□□□ -1.73
VPS41-211ENST00000466017 GGTLC1Q9BX51 225 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 SMIM3Q9BZL3 60 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 ZNF702PQ9H963 129 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 PAIP2BQ9ULR5 123 aaKnown RBP4.26□□□□□ -1.73
VPS41-211ENST00000466017 IGKV1D-37A0A075B6S9 117 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 IGKV1OR2-108A0A075B7D4 117 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 TRAV1-1A0A0B4J248 108 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 A0A0G2JLM5 398 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 TCRBV4S1A1TA0A5B7 111 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 LINC00862A6NCI5 91 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 AGPAT2O15120 278 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 NDUFS6O75380 124 aaKnown RBP4.25□□□□□ -1.73
VPS41-211ENST00000466017 NDUFB8O95169 186 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 NDUFA7O95182 113 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 FABP1P07148 127 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 LINC00869P0C866 280 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 IGLC1P0CG04 106 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 M6PRP20645 277 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 FGF7P21781 194 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 CAMLGP49069 296 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 RAB14P61106 215 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 SLC35B1P78383 322 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 ACOT6Q3I5F7 207 aaPredicted RBP4.25□□□□□ -1.73
VPS41-211ENST00000466017 Q6ZRG5 221 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 CYP2G1PQ6ZSU1 146 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 OR5T1Q8NG75 326 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 OR2T6Q8NHC8 308 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 MYOZ3Q8TDC0 251 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 NPIPB3Q92617 1050 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 RNF2Q99496 336 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 MGST2Q99735 147 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 NPCDR1Q9BY65 106 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 PARP11Q9NR21 331 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 C21orf62Q9NYP8 219 aa4.25□□□□□ -1.73
VPS41-211ENST00000466017 CCDC168Q8NDH2 2452 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ITPR2Q14571 2701 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 VPS13CQ709C8 3753 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 A0A1B0GUS0 222 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 UBE2L5PA0A1B0GUS4 154 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 DNAJC9-AS1A6NH13 148 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 SEC14L6B5MCN3 397 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 G3V318 75 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 SCGB2A1O75556 95 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 OR2J3O76001 311 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 OR2C1O95371 312 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 TOMM40O96008 361 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 HBE1P02100 147 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 REG1AP05451 166 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 NMBP08949 121 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 PSMB8P28062 276 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 OR10J1P30954 320 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 S100A7P31151 101 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 RAB9AP51151 201 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 AKR1C1Q04828 323 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ATP5G2Q06055 141 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 KIAA0141Q14154 515 aaPredicted RBP4.24□□□□□ -1.73
VPS41-211ENST00000466017 TMEM41BQ5BJD5 291 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 AKR1C8PQ5T2L2 129 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ZNF343Q6P1L6 599 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ACSM6Q6P461 480 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 TEX38Q6PEX7 206 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 SPSB3Q6PJ21 355 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ALKAL2Q6UX46 152 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 Q6ZSV7 163 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 IL17RELQ6ZVW7 336 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 S100A7AQ86SG5 101 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 EIF4E3Q8N5X7 224 aaKnown RBP4.24□□□□□ -1.73
VPS41-211ENST00000466017 HSD17B11Q8NBQ5 300 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ZNF502Q8TBZ5 544 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 WIPF2Q8TF74 440 aaPredicted RBP4.24□□□□□ -1.73
VPS41-211ENST00000466017 GATAD1Q8WUU5 269 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 TMED6Q8WW62 240 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 EEF1AKMT3Q96AZ1 226 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 SMR3AQ99954 134 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 RSG1Q9BU20 258 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ACTR3CQ9C0K3 210 aaPredicted RBP4.24□□□□□ -1.73
VPS41-211ENST00000466017 ESM1Q9NQ30 184 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 RPRMQ9NS64 109 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 TNFRSF19Q9NS68 423 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 SLC39A9Q9NUM3 307 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 MRPL36Q9P0J6 103 aaKnown RBP4.24□□□□□ -1.73
VPS41-211ENST00000466017 RNF24Q9Y225 148 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 ZNF469Q96JG9 3925 aaPredicted RBP4.24□□□□□ -1.73
VPS41-211ENST00000466017 AKAP9Q99996 3911 aa4.24□□□□□ -1.73
VPS41-211ENST00000466017 GCN1Q92616 2671 aaKnown RBP4.24□□□□□ -1.73
VPS41-211ENST00000466017 TACC2O95359 2948 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 MYO9AB2RTY4 2548 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 CSMD2Q7Z408 3487 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.23□□□□□ -1.73
VPS41-211ENST00000466017 CTXND1A0A1B0GTU2 59 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 WI2-2373I1.2A0A1W2PRP0 233 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 SMCO3A2RU48 225 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 RAB19A4D1S5 217 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 PSMB11A5LHX3 300 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 SH2D7A6NKC9 451 aaPredicted RBP4.23□□□□□ -1.73
VPS41-211ENST00000466017 ZFP92A6NM28 416 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 INAFM1C9JVW0 142 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms