RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 HAX1O00165 279 aa15.91■□□□□ 0.14
SDF4-205ENST00000465727 FNDC4Q9H6D8 234 aaPredicted RBP15.91■□□□□ 0.14
SDF4-205ENST00000465727 ZNF318Q5VUA4 2279 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 DYSFO75923 2080 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.9■□□□□ 0.14
SDF4-205ENST00000465727 IGHG3P01860 377 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 IGLC1P0CG04 106 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 LINC00322Q6ZN03 302 aaPredicted RBP15.9■□□□□ 0.14
SDF4-205ENST00000465727 VSTM2AQ8TAG5 236 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 DPF1Q92782 380 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 ZDBF2Q9HCK1 2354 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 A0A087X0K7 114 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 GATA4P43694 442 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 BPIFA4PQ86YQ2 179 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 ZCCHC24Q8N2G6 241 aaKnown RBP15.9■□□□□ 0.14
SDF4-205ENST00000465727 TMEM167AQ8TBQ9 72 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 DKK4Q9UBT3 224 aa15.9■□□□□ 0.14
SDF4-205ENST00000465727 HEATR1Q9H583 2144 aaKnown RBP15.89■□□□□ 0.13
SDF4-205ENST00000465727 TRAV8-6A0A0B4J262 113 aa15.89■□□□□ 0.13
SDF4-205ENST00000465727 C7orf71A4D174 169 aa15.89■□□□□ 0.13
SDF4-205ENST00000465727 NBEAP1P0C6P0 100 aa15.89■□□□□ 0.13
SDF4-205ENST00000465727 ITLN1Q8WWA0 313 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 CACNA1GO43497 2377 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 TCRAP04437 139 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 ARF6P62330 175 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 WT1-ASQ06250 92 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 GTF2H5Q6ZYL4 71 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 BLNKQ8WV28 456 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 PLSCR4Q9NRQ2 329 aa15.88■□□□□ 0.13
SDF4-205ENST00000465727 CD24P25063 80 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 MSMPQ1L6U9 139 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 C2orf91Q6ZV80 131 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 OR5AN1Q8NGI8 311 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 RNF7Q9UBF6 113 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 APOHP02749 345 aaPredicted RBP15.87■□□□□ 0.13
SDF4-205ENST00000465727 HTR1DP28221 377 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 ZNF137PP52743 207 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 SPRNQ5BIV9 151 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 NEU4Q8WWR8 484 aaPredicted RBP15.87■□□□□ 0.13
SDF4-205ENST00000465727 TMEM190Q8WZ59 177 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 RND1Q92730 232 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 FLYWCH2Q96CP2 140 aaKnown RBP15.87■□□□□ 0.13
SDF4-205ENST00000465727 SGK494Q96LW2 274 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 GAFA1Q96PS6 74 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 AP5S1Q9NUS5 200 aa15.87■□□□□ 0.13
SDF4-205ENST00000465727 PRR14LQ5THK1 2151 aa15.86■□□□□ 0.13
SDF4-205ENST00000465727 GAGE10A6NGK3 116 aa15.86■□□□□ 0.13
SDF4-205ENST00000465727 CSN1S1P47710 185 aa15.86■□□□□ 0.13
SDF4-205ENST00000465727 TMEM97Q5BJF2 176 aa15.86■□□□□ 0.13
SDF4-205ENST00000465727 OR10X1Q8NGY0 326 aa15.86■□□□□ 0.13
SDF4-205ENST00000465727 TMUB1Q9BVT8 246 aa15.86■□□□□ 0.13
SDF4-205ENST00000465727 MRPL20Q9BYC9 149 aaKnown RBP15.86■□□□□ 0.13
SDF4-205ENST00000465727 RPH3ALQ9UNE2 315 aa15.86■□□□□ 0.13
SDF4-205ENST00000465727 hADV38S2A0JD32 116 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 PLAUP00749 431 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 COL8A1P27658 744 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 C9orf106Q8NAJ2 232 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 GATD1Q8NB37 220 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 OR4C13Q8NGP0 309 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 A0A1W2PNU3 283 aaPredicted RBP15.85■□□□□ 0.13
SDF4-205ENST00000465727 E7EUB6 86 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 GP9P14770 177 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 ORM2P19652 201 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 UFSP1Q6NVU6 142 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 DUX4L9Q6RFH8 374 aaPredicted RBP15.85■□□□□ 0.13
SDF4-205ENST00000465727 C16orf54Q6UWD8 224 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 ZNF788Q6ZQV5 615 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 BHLHA15Q7RTS1 189 aaPredicted RBP15.85■□□□□ 0.13
SDF4-205ENST00000465727 OR1B1Q8NGR6 318 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 TRGV9Q99603 122 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 ZNF747Q9BV97 191 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 ZNF71Q9NQZ8 489 aaPredicted RBP15.85■□□□□ 0.13
SDF4-205ENST00000465727 SLC25A15Q9Y619 301 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 LINC00312Q9Y6C7 94 aa15.85■□□□□ 0.13
SDF4-205ENST00000465727 A0A1B0GW15 77 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 A6NDN8 102 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 CGB1A6NKQ9 187 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 SPRY3O43610 288 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 ZNF883P0CG24 379 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 PRR31Q5SQ13 230 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 FAM201AQ5SY85 155 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 Q9H3A6 140 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 MUC6Q6W4X9 2439 aa15.84■□□□□ 0.13
SDF4-205ENST00000465727 GLRXP35754 106 aa15.83■□□□□ 0.13
SDF4-205ENST00000465727 Q86TA4 180 aa15.83■□□□□ 0.13
SDF4-205ENST00000465727 OR10AG1Q8NH19 301 aa15.83■□□□□ 0.13
SDF4-205ENST00000465727 AP1S3Q96PC3 154 aa15.83■□□□□ 0.13
SDF4-205ENST00000465727 RAI1Q7Z5J4 1906 aaPredicted RBP15.83■□□□□ 0.12
SDF4-205ENST00000465727 WDFY4Q6ZS81 3184 aa15.83■□□□□ 0.12
SDF4-205ENST00000465727 H0Y8G0 127 aa15.83■□□□□ 0.12
SDF4-205ENST00000465727 H3BRM9 83 aa15.83■□□□□ 0.12
SDF4-205ENST00000465727 CRYGCP07315 174 aa15.83■□□□□ 0.12
SDF4-205ENST00000465727 FAM87AP0C7U9 286 aa15.83■□□□□ 0.12
SDF4-205ENST00000465727 OR1N2Q8NGR9 330 aa15.83■□□□□ 0.12
SDF4-205ENST00000465727 MEGF9Q9H1U4 602 aa15.83■□□□□ 0.12
SDF4-205ENST00000465727 VPS13AQ96RL7 3174 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 NBEAQ8NFP9 2946 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 IGLV3-9A0A075B6K5 115 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 TRBV6-1A0A0K0K1D8 114 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms