RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 Q8WTZ3 238 aa16.82■□□□□ 0.28
ITGA4-204ENST00000465522 ACTR3CQ9C0K3 210 aaPredicted RBP16.82■□□□□ 0.28
ITGA4-204ENST00000465522 A0A1W2PPV4 95 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 TGOLN2O43493 480 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 NDUFA7O95182 113 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 ZNF343Q6P1L6 599 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 ZNF491Q8N8L2 437 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 RNF152Q8N8N0 203 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 RCC1LQ96I51 464 aaKnown RBP16.81■□□□□ 0.28
ITGA4-204ENST00000465522 C19orf24Q9BVV8 132 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 HRH4Q9H3N8 390 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 GNB4Q9HAV0 340 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 DNAJC4Q9NNZ3 241 aa16.81■□□□□ 0.28
ITGA4-204ENST00000465522 ORM2P19652 201 aa16.8■□□□□ 0.28
ITGA4-204ENST00000465522 SRSF2Q01130 221 aaKnown RBP16.8■□□□□ 0.28
ITGA4-204ENST00000465522 KIAA0141Q14154 515 aaPredicted RBP16.8■□□□□ 0.28
ITGA4-204ENST00000465522 SPSB3Q6PJ21 355 aa16.8■□□□□ 0.28
ITGA4-204ENST00000465522 OR1L4Q8NGR5 311 aa16.8■□□□□ 0.28
ITGA4-204ENST00000465522 OR1B1Q8NGR6 318 aa16.8■□□□□ 0.28
ITGA4-204ENST00000465522 SFT2D1Q8WV19 159 aa16.8■□□□□ 0.28
ITGA4-204ENST00000465522 DOK5Q9P104 306 aa16.8■□□□□ 0.28
ITGA4-204ENST00000465522 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.79■□□□□ 0.28
ITGA4-204ENST00000465522 COX7A2P2O60397 106 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 CDC34P49427 236 aaPredicted RBP16.79■□□□□ 0.28
ITGA4-204ENST00000465522 ZNF726P1Q15940 193 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 GATAD1Q8WUU5 269 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 TMEM37Q8WXS4 190 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 PFDN5Q99471 154 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 SLC25A22Q9H936 323 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 ELOA3CA0A087WX78 387 aaPredicted RBP16.79■□□□□ 0.28
ITGA4-204ENST00000465522 ANKRD34BA5PLL1 514 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 PPP5D1E7EU14 171 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 OR5G3P0C626 314 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 ARL3P36405 182 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 LYZP61626 148 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 RHOBP62745 196 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 FAM78BQ5VT40 261 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 OR4F5Q8NH21 305 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 RAB24Q969Q5 203 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 OR5B12Q96R08 314 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 PBDC1Q9BVG4 233 aa16.79■□□□□ 0.28
ITGA4-204ENST00000465522 SEPSECSQ9HD40 501 aaKnown RBP16.79■□□□□ 0.28
ITGA4-204ENST00000465522 IGHV3-35A0A0C4DH35 117 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 CTXND1A0A1B0GTU2 59 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 SEC14L6B5MCN3 397 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 HYPMO75409 117 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 PLP1P60201 277 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 C10orf113Q5VZT2 155 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 LCN15Q6UWW0 184 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 ZNF600Q6ZNG1 722 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 SSX7Q7RTT5 188 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 MYOZ3Q8TDC0 251 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 MBD3L1Q8WWY6 194 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 UBE2E2Q96LR5 201 aa16.78■□□□□ 0.28
ITGA4-204ENST00000465522 A0A1B0GV50 99 aa16.77■□□□□ 0.28
ITGA4-204ENST00000465522 EIF3GO75821 320 aaKnown RBP eCLIP16.77■□□□□ 0.28
ITGA4-204ENST00000465522 TRBV12-3P01733 135 aa16.77■□□□□ 0.28
ITGA4-204ENST00000465522 IL4P05112 153 aa16.77■□□□□ 0.28
ITGA4-204ENST00000465522 FAM209BQ5JX69 171 aa16.77■□□□□ 0.28
ITGA4-204ENST00000465522 PATE2Q6UY27 113 aa16.77■□□□□ 0.28
ITGA4-204ENST00000465522 PUS1Q9Y606 427 aaKnown RBP eCLIP16.77■□□□□ 0.28
ITGA4-204ENST00000465522 WI2-2373I1.2A0A1W2PRP0 233 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 TEX46H3BTG2 121 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 HMGB3O15347 200 aaKnown RBP16.76■□□□□ 0.27
ITGA4-204ENST00000465522 OR2C1O95371 312 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 RELQ04864 619 aaPredicted RBP16.76■□□□□ 0.27
ITGA4-204ENST00000465522 LYPD6BQ8NI32 183 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 RNF125Q96EQ8 232 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 RNF2Q99496 336 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 PEF1Q9UBV8 284 aaKnown RBP16.76■□□□□ 0.27
ITGA4-204ENST00000465522 RNF114Q9Y508 228 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 HAX1O00165 279 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 HBE1P02100 147 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 NDUFA5Q16718 116 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 PFDN2Q9UHV9 154 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 FUT9Q9Y231 359 aa16.76■□□□□ 0.27
ITGA4-204ENST00000465522 MAP1LC3B2A6NCE7 125 aa16.75■□□□□ 0.27
ITGA4-204ENST00000465522 LINC00862A6NCI5 91 aa16.75■□□□□ 0.27
ITGA4-204ENST00000465522 FGF8P55075 233 aaPredicted RBP16.75■□□□□ 0.27
ITGA4-204ENST00000465522 SPATA31B1PQ5VZV4 182 aa16.75■□□□□ 0.27
ITGA4-204ENST00000465522 LINC00305Q7Z4B0 112 aa16.75■□□□□ 0.27
ITGA4-204ENST00000465522 WIPF2Q8TF74 440 aaPredicted RBP16.75■□□□□ 0.27
ITGA4-204ENST00000465522 UHRF2Q96PU4 802 aa16.75■□□□□ 0.27
ITGA4-204ENST00000465522 MAP1LC3BQ9GZQ8 125 aa16.75■□□□□ 0.27
ITGA4-204ENST00000465522 TRAV1-1A0A0B4J248 108 aa16.74■□□□□ 0.27
ITGA4-204ENST00000465522 CLPSL1A2RUU4 121 aa16.74■□□□□ 0.27
ITGA4-204ENST00000465522 TCTEX1D4Q5JR98 221 aa16.74■□□□□ 0.27
ITGA4-204ENST00000465522 MIR17HGQ75NE6 70 aa16.74■□□□□ 0.27
ITGA4-204ENST00000465522 MRPL32Q9BYC8 188 aaKnown RBP16.74■□□□□ 0.27
ITGA4-204ENST00000465522 HIGD1AQ9Y241 93 aa16.74■□□□□ 0.27
ITGA4-204ENST00000465522 TOMM20LQ6UXN7 152 aa16.73■□□□□ 0.27
ITGA4-204ENST00000465522 MRPL27Q9P0M9 148 aaKnown RBP16.73■□□□□ 0.27
ITGA4-204ENST00000465522 GGCTO75223 188 aaKnown RBP16.73■□□□□ 0.27
ITGA4-204ENST00000465522 LGALS1P09382 135 aaKnown RBP16.73■□□□□ 0.27
ITGA4-204ENST00000465522 CDX1P47902 265 aaPredicted RBP16.73■□□□□ 0.27
ITGA4-204ENST00000465522 USF2Q15853 346 aaPredicted RBP16.73■□□□□ 0.27
ITGA4-204ENST00000465522 KHDC1LQ5JSQ8 128 aa16.73■□□□□ 0.27
ITGA4-204ENST00000465522 BMPR1BO00238 502 aa16.72■□□□□ 0.27
ITGA4-204ENST00000465522 STAG3L2P0CL84 134 aa16.72■□□□□ 0.27
ITGA4-204ENST00000465522 STAG3L3P0CL85 134 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms