RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 OR10P1Q8NGE3 313 aa15.24■□□□□ 0.03
SKA3-205ENST00000465471 OR51G1Q8NGK1 321 aa15.24■□□□□ 0.03
SKA3-205ENST00000465471 SPAG8Q99932 426 aaPredicted RBP15.24■□□□□ 0.03
SKA3-205ENST00000465471 IGHV3OR16-13A0A075B7E8 117 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 IGHV3-74A0A0B4J1X5 117 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 A8MZ25 164 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 BMI1P35226 326 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 AKR1C1Q04828 323 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 LAMTOR1Q6IAA8 161 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 LILRB2Q8N423 598 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 RNF125Q96EQ8 232 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 GGACTQ9BVM4 153 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 MGAT4CQ9UBM8 478 aa15.23■□□□□ 0.03
SKA3-205ENST00000465471 FAM24AA6NFZ4 105 aa15.22■□□□□ 0.03
SKA3-205ENST00000465471 FABP1P07148 127 aa15.22■□□□□ 0.03
SKA3-205ENST00000465471 CD7P09564 240 aa15.22■□□□□ 0.03
SKA3-205ENST00000465471 CAV2P51636 162 aa15.22■□□□□ 0.03
SKA3-205ENST00000465471 CD81P60033 236 aa15.22■□□□□ 0.03
SKA3-205ENST00000465471 B9D2Q9BPU9 175 aa15.22■□□□□ 0.03
SKA3-205ENST00000465471 NEURL2Q9BR09 285 aa15.22■□□□□ 0.03
SKA3-205ENST00000465471 A0A1W2PS18 150 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 IGSF23A1L1A6 192 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 H0YIZ8 118 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 CD5P06127 495 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 HNRNPCP07910 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
SKA3-205ENST00000465471 BCAP31P51572 246 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 RRAS2P62070 204 aaPredicted RBP15.21■□□□□ 0.03
SKA3-205ENST00000465471 TMEM252Q8N6L7 170 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 PPP1R1CQ8WVI7 109 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 TMEM231Q9H6L2 316 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 C19orf73Q9NVV2 129 aa15.21■□□□□ 0.03
SKA3-205ENST00000465471 IGHV4-30-4P0DP06 118 aa15.2■□□□□ 0.02
SKA3-205ENST00000465471 CXCL3P19876 107 aa15.2■□□□□ 0.02
SKA3-205ENST00000465471 SULT1A1P50225 295 aa15.2■□□□□ 0.02
SKA3-205ENST00000465471 NPVFQ9HCQ7 196 aa15.2■□□□□ 0.02
SKA3-205ENST00000465471 OR5AC2Q9NZP5 309 aa15.2■□□□□ 0.02
SKA3-205ENST00000465471 IGHV3-66A0A0C4DH42 116 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 SMCO3A2RU48 225 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 E5RGE8 158 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 CST7O76096 145 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 CFDP00746 253 aaPredicted RBP15.19■□□□□ 0.02
SKA3-205ENST00000465471 SLC38A11Q08AI6 406 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 OR2F1Q13607 317 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 LRRC37A5PQ49AS3 106 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 TMEM182Q6ZP80 229 aaPredicted RBP15.19■□□□□ 0.02
SKA3-205ENST00000465471 TCF24Q7RTU0 167 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 RABAC1Q9UI14 185 aa15.19■□□□□ 0.02
SKA3-205ENST00000465471 COL7A1Q02388 2944 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 BUB3O43684 328 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 DFFBO76075 338 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 RLN2P04090 185 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 P2RY1P47900 373 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 EIF2B2P49770 351 aaKnown RBP15.18■□□□□ 0.02
SKA3-205ENST00000465471 VWC2Q2TAL6 325 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 C16orf54Q6UWD8 224 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 STPG3Q8N7X2 389 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 GLMPQ8WWB7 406 aa15.18■□□□□ 0.02
SKA3-205ENST00000465471 NARS2Q96I59 477 aaKnown RBP15.18■□□□□ 0.02
SKA3-205ENST00000465471 OR4C46A6NHA9 309 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 MPC2O95563 127 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 FRMD6-AS1P0C7T7 363 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 LYZP61626 148 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 FCN2Q15485 313 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 TEPPQ6URK8 271 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 CYP2G1PQ6ZSU1 146 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 STX12Q86Y82 276 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 OR11H7Q8NGC8 314 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 FAM110AQ9BQ89 295 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 RNF126Q9BV68 326 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 WFDC10AQ9H1F0 79 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 MED28Q9H204 178 aa15.17■□□□□ 0.02
SKA3-205ENST00000465471 TRAV2A0A0B4J234 112 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 GATA2P23769 480 aaPredicted RBP15.16■□□□□ 0.02
SKA3-205ENST00000465471 S100A11P31949 105 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 ODF3L2Q3SX64 289 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 TMEM217Q8N7C4 229 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 BPIFCQ8NFQ6 507 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 GRAMD2BQ96HH9 432 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 PBDC1Q9BVG4 233 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 SLC45A2Q9UMX9 530 aa15.16■□□□□ 0.02
SKA3-205ENST00000465471 OR11H12B2RN74 326 aa15.15■□□□□ 0.02
SKA3-205ENST00000465471 PET100P0DJ07 73 aa15.15■□□□□ 0.02
SKA3-205ENST00000465471 NUP62P37198 522 aaPredicted RBP15.15■□□□□ 0.02
SKA3-205ENST00000465471 SELENOTP62341 195 aa15.15■□□□□ 0.02
SKA3-205ENST00000465471 HBG1P69891 147 aa15.15■□□□□ 0.02
SKA3-205ENST00000465471 HBG2P69892 147 aa15.15■□□□□ 0.02
SKA3-205ENST00000465471 DEFB125Q8N687 156 aa15.15■□□□□ 0.02
SKA3-205ENST00000465471 MS4A6AQ9H2W1 248 aa15.15■□□□□ 0.02
SKA3-205ENST00000465471 LYL1P12980 280 aa15.14■□□□□ 0.01
SKA3-205ENST00000465471 PLP1P60201 277 aa15.14■□□□□ 0.01
SKA3-205ENST00000465471 EWSR1Q01844 656 aaKnown RBP eCLIP15.14■□□□□ 0.01
SKA3-205ENST00000465471 LINC00322Q6ZN03 302 aaPredicted RBP15.14■□□□□ 0.01
SKA3-205ENST00000465471 TMEM147Q9BVK8 224 aa15.14■□□□□ 0.01
SKA3-205ENST00000465471 UQCC1Q9NVA1 299 aa15.14■□□□□ 0.01
SKA3-205ENST00000465471 WDR83OSQ9Y284 106 aa15.14■□□□□ 0.01
SKA3-205ENST00000465471 HELTA6NFD8 242 aa15.13■□□□□ 0.01
SKA3-205ENST00000465471 NHLH2Q02577 135 aa15.13■□□□□ 0.01
SKA3-205ENST00000465471 BAXQ07812 192 aa15.13■□□□□ 0.01
SKA3-205ENST00000465471 ATP6V1FQ16864 119 aa15.13■□□□□ 0.01
SKA3-205ENST00000465471 MGST2Q99735 147 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms