RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 GSTZ1O43708 216 aaPredicted RBP15.08■□□□□ 0
CSPG5-204ENST00000465441 CCR6P51684 374 aa15.08■□□□□ 0
CSPG5-204ENST00000465441 SCGB3A2Q96PL1 93 aa15.08■□□□□ 0
CSPG5-204ENST00000465441 SEPSECSQ9HD40 501 aaKnown RBP15.08■□□□□ 0
CSPG5-204ENST00000465441 TBC1D24Q9ULP9 559 aa15.08■□□□□ 0
CSPG5-204ENST00000465441 DNAH6Q9C0G6 4158 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 AKR1C4P17516 323 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 SUPT4H1P63272 117 aaKnown RBP15.07■□□□□ 0
CSPG5-204ENST00000465441 SMCO1Q147U7 214 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 SIGLEC15Q6ZMC9 328 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 Q6ZTC4 211 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 OR51G1Q8NGK1 321 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 DTD1Q8TEA8 209 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 RBKSQ9H477 322 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 NRN1Q9NPD7 142 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 HSPB7Q9UBY9 170 aa15.07■□□□□ 0
CSPG5-204ENST00000465441 A0A0B4J2A0 478 aa15.06■□□□□ 0
CSPG5-204ENST00000465441 SNRPD3P62318 126 aaKnown RBP15.06■□□□□ 0
CSPG5-204ENST00000465441 KLF9Q13886 244 aaPredicted RBP15.06■□□□□ 0
CSPG5-204ENST00000465441 LGI3Q8N145 548 aa15.06■□□□□ 0
CSPG5-204ENST00000465441 SOSTQ9BQB4 213 aa15.06■□□□□ 0
CSPG5-204ENST00000465441 SLIRPQ9GZT3 109 aaKnown RBP15.06■□□□□ 0
CSPG5-204ENST00000465441 MCUBQ9NWR8 336 aa15.06■□□□□ 0
CSPG5-204ENST00000465441 RSL24D1Q9UHA3 163 aaKnown RBP15.06■□□□□ 0
CSPG5-204ENST00000465441 SHPKQ9UHJ6 478 aa15.06■□□□□ 0
CSPG5-204ENST00000465441 TRAV10A0A0B4J240 114 aa15.05■□□□□ -0
CSPG5-204ENST00000465441 H3BMM0 161 aa15.05■□□□□ -0
CSPG5-204ENST00000465441 FABP12A6NFH5 140 aa15.04■□□□□ -0
CSPG5-204ENST00000465441 TNFSF8P32971 234 aa15.04■□□□□ -0
CSPG5-204ENST00000465441 CENPSQ8N2Z9 138 aa15.04■□□□□ -0
CSPG5-204ENST00000465441 RNF125Q96EQ8 232 aa15.04■□□□□ -0
CSPG5-204ENST00000465441 XCL2Q9UBD3 114 aa15.04■□□□□ -0
CSPG5-204ENST00000465441 GPX4P36969 197 aaPredicted RBP15.03■□□□□ -0
CSPG5-204ENST00000465441 NUTF2P61970 127 aaKnown RBP15.03■□□□□ -0
CSPG5-204ENST00000465441 ZNF90Q03938 601 aa15.03■□□□□ -0
CSPG5-204ENST00000465441 GAMTQ14353 236 aa15.03■□□□□ -0
CSPG5-204ENST00000465441 C12orf74Q32Q52 190 aa15.03■□□□□ -0
CSPG5-204ENST00000465441 PBDC1Q9BVG4 233 aa15.03■□□□□ -0
CSPG5-204ENST00000465441 C1QTNF4Q9BXJ3 329 aa15.03■□□□□ -0
CSPG5-204ENST00000465441 RBM38Q9H0Z9 239 aaKnown RBP15.03■□□□□ -0
CSPG5-204ENST00000465441 CELA1Q9UNI1 258 aa15.03■□□□□ -0
CSPG5-204ENST00000465441 IGHV4-4A0A075B6R2 117 aa15.02■□□□□ -0
CSPG5-204ENST00000465441 IGKV1D-37A0A075B6S9 117 aa15.02■□□□□ -0
CSPG5-204ENST00000465441 ANXA3P12429 323 aa15.02■□□□□ -0
CSPG5-204ENST00000465441 ATP5IP56385 69 aaPredicted RBP15.02■□□□□ -0
CSPG5-204ENST00000465441 ZNF767PQ75MW2 155 aa15.02■□□□□ -0
CSPG5-204ENST00000465441 OR1S1Q8NH92 325 aa15.02■□□□□ -0
CSPG5-204ENST00000465441 ZFP92A6NM28 416 aa15.01□□□□□ -0.01
CSPG5-204ENST00000465441 NKX2-1P43699 371 aaPredicted RBP15.01□□□□□ -0.01
CSPG5-204ENST00000465441 DEFB1P60022 68 aa15.01□□□□□ -0.01
CSPG5-204ENST00000465441 GDF5OSQ5U4N7 250 aa15.01□□□□□ -0.01
CSPG5-204ENST00000465441 PITX3O75364 302 aa15□□□□□ -0.01
CSPG5-204ENST00000465441 HLA-DRB4P13762 266 aa15□□□□□ -0.01
CSPG5-204ENST00000465441 OR8G2PQ6IF36 304 aa15□□□□□ -0.01
CSPG5-204ENST00000465441 SLC35E1Q96K37 410 aa15□□□□□ -0.01
CSPG5-204ENST00000465441 WDR12Q9GZL7 423 aaKnown RBP15□□□□□ -0.01
CSPG5-204ENST00000465441 PFDN2Q9UHV9 154 aa15□□□□□ -0.01
CSPG5-204ENST00000465441 HLA-DRB4X5D2U9 266 aa15□□□□□ -0.01
CSPG5-204ENST00000465441 DEFB131BA0A096LNP1 70 aa14.99□□□□□ -0.01
CSPG5-204ENST00000465441 ZNF701M0R085 212 aaPredicted RBP14.99□□□□□ -0.01
CSPG5-204ENST00000465441 SRPXP78539 464 aa14.99□□□□□ -0.01
CSPG5-204ENST00000465441 GSG1LQ6UXU4 331 aa14.99□□□□□ -0.01
CSPG5-204ENST00000465441 MCFD2Q8NI22 146 aa14.99□□□□□ -0.01
CSPG5-204ENST00000465441 LINC00052Q96N35 136 aa14.99□□□□□ -0.01
CSPG5-204ENST00000465441 RNF126Q9BV68 326 aa14.99□□□□□ -0.01
CSPG5-204ENST00000465441 SNRPGP15A8MWD9 76 aa14.98□□□□□ -0.01
CSPG5-204ENST00000465441 IGKV3-20P01619 116 aa14.98□□□□□ -0.01
CSPG5-204ENST00000465441 NUP62P37198 522 aaPredicted RBP14.98□□□□□ -0.01
CSPG5-204ENST00000465441 FXYD7P58549 80 aa14.98□□□□□ -0.01
CSPG5-204ENST00000465441 OR2F1Q13607 317 aa14.98□□□□□ -0.01
CSPG5-204ENST00000465441 TMED4Q7Z7H5 227 aa14.98□□□□□ -0.01
CSPG5-204ENST00000465441 IAPPP10997 89 aa14.97□□□□□ -0.01
CSPG5-204ENST00000465441 ID1P41134 155 aa14.97□□□□□ -0.01
CSPG5-204ENST00000465441 LYZP61626 148 aa14.97□□□□□ -0.01
CSPG5-204ENST00000465441 RAB11AP62491 216 aa14.97□□□□□ -0.01
CSPG5-204ENST00000465441 ZNF705AQ6ZN79 300 aaPredicted RBP14.97□□□□□ -0.01
CSPG5-204ENST00000465441 NEU1Q99519 415 aa14.97□□□□□ -0.01
CSPG5-204ENST00000465441 SCRT1Q9BWW7 348 aa14.97□□□□□ -0.01
CSPG5-204ENST00000465441 SAV1Q9H4B6 383 aaPredicted RBP14.97□□□□□ -0.01
CSPG5-204ENST00000465441 DUXBA0A1W2PPF3 345 aa14.96□□□□□ -0.01
CSPG5-204ENST00000465441 CCDC160A6NGH7 325 aa14.96□□□□□ -0.01
CSPG5-204ENST00000465441 SOCS3O14543 225 aa14.96□□□□□ -0.01
CSPG5-204ENST00000465441 TMEM128Q5BJH2 165 aa14.96□□□□□ -0.01
CSPG5-204ENST00000465441 C1orf194Q5T5A4 169 aa14.96□□□□□ -0.01
CSPG5-204ENST00000465441 TRGV9Q99603 122 aa14.96□□□□□ -0.01
CSPG5-204ENST00000465441 PAIP2BQ9ULR5 123 aaKnown RBP14.96□□□□□ -0.01
CSPG5-204ENST00000465441 IGKV1OR2-108A0A075B7D4 117 aa14.95□□□□□ -0.02
CSPG5-204ENST00000465441 PIGBOS1A0A0B4J2F0 54 aa14.95□□□□□ -0.02
CSPG5-204ENST00000465441 FABP1P07148 127 aa14.95□□□□□ -0.02
CSPG5-204ENST00000465441 FAUP35544 74 aaKnown RBP14.95□□□□□ -0.02
CSPG5-204ENST00000465441 FOXI2Q6ZQN5 318 aa14.95□□□□□ -0.02
CSPG5-204ENST00000465441 TOMM5Q8N4H5 51 aa14.95□□□□□ -0.02
CSPG5-204ENST00000465441 LRTM2Q8N967 370 aa14.95□□□□□ -0.02
CSPG5-204ENST00000465441 KRTAP17-1Q9BYP8 105 aa14.95□□□□□ -0.02
CSPG5-204ENST00000465441 IGHV3OR16-12A0A075B7B8 117 aa14.94□□□□□ -0.02
CSPG5-204ENST00000465441 ZNF705FA8MVS1 300 aaPredicted RBP14.94□□□□□ -0.02
CSPG5-204ENST00000465441 ZNF705DP0CH99 300 aaPredicted RBP14.94□□□□□ -0.02
CSPG5-204ENST00000465441 ZNF705BP0CI00 300 aaPredicted RBP14.94□□□□□ -0.02
CSPG5-204ENST00000465441 PSMB3P49720 205 aa14.94□□□□□ -0.02
CSPG5-204ENST00000465441 PYDC2Q56P42 97 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms