RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 INSL3P51460 131 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 SLC38A11Q08AI6 406 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 NEDD8Q15843 81 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 NOXRED1Q6NXP6 359 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 LINC00305Q7Z4B0 112 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 LHFPL1Q86WI0 220 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 MSRB3Q8IXL7 192 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 RPP25LQ8N5L8 163 aaKnown RBP2.56□□□□□ -2
PTCD3-205ENST00000464541 OR4S1Q8NGB4 309 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 TERB2Q8NHR7 220 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 CLDND2Q8NHS1 167 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 CARD19Q96LW7 228 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 C12orf57Q99622 126 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 OTORQ9NRC9 128 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 GNG8Q9UK08 70 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 RTL9Q8NET4 1388 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 OVOS2A0A0J9YW53 1432 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 OVOS2Q6IE36 1432 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 CD109Q6YHK3 1445 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 A2MP01023 1474 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 TICRRQ7Z2Z1 1910 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 SVILO95425 2214 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 IGHV1-58A0A0C4DH39 117 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 A0A0J9YW62 118 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 TMEM235A6NFC5 223 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 H3BQ85 93 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 J3QQQ9 107 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 SLC22A1O15245 554 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 NAPSAO96009 420 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 IFNA4P05014 189 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 MSMBP08118 114 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 CD24P25063 80 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 RPL35P42766 123 aaKnown RBP2.55□□□□□ -2
PTCD3-205ENST00000464541 DYNLT3P51808 116 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 TMBIM6P55061 237 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 COPZ1P61923 177 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 RPS25P62851 125 aaKnown RBP2.55□□□□□ -2
PTCD3-205ENST00000464541 CRB1P82279 1406 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 LDLRAD2Q5SZI1 272 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 VIRMAQ69YN4 1812 aaKnown RBP2.55□□□□□ -2
PTCD3-205ENST00000464541 ZNF518AQ6AHZ1 1483 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 EIF5AL1Q6IS14 154 aaKnown RBP2.55□□□□□ -2
PTCD3-205ENST00000464541 C22orf39Q6P5X5 142 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 DPPA3Q6W0C5 159 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 DSCAML1Q8TD84 2053 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 SMCR5Q8TEV8 140 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 TMEM106AQ96A25 262 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 ZNF714Q96N38 554 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 PDCD10Q9BUL8 212 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 MRPL32Q9BYC8 188 aaKnown RBP2.55□□□□□ -2
PTCD3-205ENST00000464541 ASF1BQ9NVP2 202 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 TXNL4BQ9NX01 149 aaKnown RBP2.55□□□□□ -2
PTCD3-205ENST00000464541 OR5AC2Q9NZP5 309 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 EPDR1Q9UM22 224 aa2.55□□□□□ -2
PTCD3-205ENST00000464541 OTOFQ9HC10 1997 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 KIF13BQ9NQT8 1826 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 BICRAQ9NZM4 1560 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 RPRD2Q5VT52 1461 aaKnown RBP2.54□□□□□ -2
PTCD3-205ENST00000464541 BAZ1BQ9UIG0 1483 aaKnown RBP2.54□□□□□ -2
PTCD3-205ENST00000464541 DISP2A7MBM2 1401 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 TRBV7-6A0A0J9YX20 115 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 A0A1W2PQD3 144 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 TMEM256-PLSCR3K7ERE1 68 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 NDUFB3O43676 98 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 SOD1P00441 154 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 PSMB8P28062 276 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 EIF2B2P49770 351 aaKnown RBP2.54□□□□□ -2
PTCD3-205ENST00000464541 LSM3P62310 102 aaKnown RBP2.54□□□□□ -2
PTCD3-205ENST00000464541 HBBP68871 147 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 ZNF117Q03924 483 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 RNASE10Q5GAN6 216 aaKnown RBP2.54□□□□□ -2
PTCD3-205ENST00000464541 PDZD9Q8IXQ8 264 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 OR5D16Q8NGK9 328 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 STAG3L4Q8TBR4 150 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 NPCDR1Q9BY65 106 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 TTTY13Q9BZ97 58 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 LINC00470Q9BZP3 86 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 LPAR5Q9H1C0 372 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 TIMM9Q9Y5J7 89 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 DOCK6Q96HP0 2047 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 PLXNB3Q9ULL4 1909 aa2.54□□□□□ -2
PTCD3-205ENST00000464541 PTPRGP23470 1445 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 TRAPPC8Q9Y2L5 1435 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 IGKV1OR2-108A0A075B7D4 117 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 TRAV13-1A0A0B4J241 112 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 A0A0D9SEW6 157 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 A0A0D9SG52 128 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 LOC107984640A0A0U1RRK4 108 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 A0A1B0GW64 132 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 C7orf71A4D174 169 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 H3BMG7 143 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 H3BPC8 53 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 TP53I11O14683 189 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 GNG7O60262 68 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 HIST1H2BKO60814 126 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 HIST1H2BJP06899 126 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 GPX1P07203 203 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 GZMBP10144 247 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 HRES1P13985 223 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 ZNF25P17030 456 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms