RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 LYZL2Q7Z4W2 148 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 CSNK1G2-AS1Q8NCQ2 148 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 RBKSQ9H477 322 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 PFDN2Q9UHV9 154 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 DUXBA0A1W2PPF3 345 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 FAM90A26D6RGX4 464 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 RBMY1A1P0DJD3 496 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 RBMY1CP0DJD4 496 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 PSG1P11464 419 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 C4BPBP20851 252 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 FAUP35544 74 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 RBMY1FQ15415 496 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 OR8G2PQ6IF36 304 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 RPP25LQ8N5L8 163 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 OR51G1Q8NGK1 321 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 X6R8D5 127 aa10.42□□□□□ -0.74
SNRNP40-203ENST00000463988 AP3S2P59780 193 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 TMEM128Q5BJH2 165 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 MCFD2Q8NI22 146 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 DEDD2Q8WXF8 326 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 RNF125Q96EQ8 232 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 C1QTNF4Q9BXJ3 329 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 TBC1D24Q9ULP9 559 aa10.41□□□□□ -0.74
SNRNP40-203ENST00000463988 PITX3O75364 302 aa10.4□□□□□ -0.74
SNRNP40-203ENST00000463988 FABP1P07148 127 aa10.4□□□□□ -0.74
SNRNP40-203ENST00000463988 SLC25A6P12236 298 aa10.4□□□□□ -0.74
SNRNP40-203ENST00000463988 GAMTQ14353 236 aa10.4□□□□□ -0.74
SNRNP40-203ENST00000463988 LRTM2Q8N967 370 aa10.4□□□□□ -0.74
SNRNP40-203ENST00000463988 OR1S1Q8NH92 325 aa10.4□□□□□ -0.74
SNRNP40-203ENST00000463988 FRAS1Q86XX4 4008 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 ZFP92A6NM28 416 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 H3BMM0 161 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 DEDDO75618 318 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 HLA-DMBP28068 263 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 NKX2-1P43699 371 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 CENPSQ8N2Z9 138 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 TRIM63Q969Q1 353 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 SLC35E1Q96K37 410 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 SLC25A21Q9BQT8 299 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 CLEC5AQ9NY25 188 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 APLNQ9ULZ1 77 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 VPS13DQ5THJ4 4388 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 DNAH10Q8IVF4 4471 aa10.39□□□□□ -0.75
SNRNP40-203ENST00000463988 IGKV1D-37A0A075B6S9 117 aa10.38□□□□□ -0.75
SNRNP40-203ENST00000463988 ELOA3CA0A087WX78 387 aaPredicted RBP10.38□□□□□ -0.75
SNRNP40-203ENST00000463988 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
SNRNP40-203ENST00000463988 RAB11AP62491 216 aa10.38□□□□□ -0.75
SNRNP40-203ENST00000463988 TMED4Q7Z7H5 227 aa10.38□□□□□ -0.75
SNRNP40-203ENST00000463988 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
SNRNP40-203ENST00000463988 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
SNRNP40-203ENST00000463988 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 SNRPGP15A8MWD9 76 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 IGLL5B9A064 214 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 MED6O75586 246 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 ZNF90Q03938 601 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 PYDC2Q56P42 97 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 CLUHP3Q96NS8 147 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 CIB3Q96Q77 187 aaPredicted RBP10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 TRGV9Q99603 122 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 PBDC1Q9BVG4 233 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 TMED3Q9Y3Q3 217 aa10.37□□□□□ -0.75
SNRNP40-203ENST00000463988 CFDP00746 253 aaPredicted RBP10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 VAMP1P23763 118 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 ID1P41134 155 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 PSMB3P49720 205 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 SAMD13Q5VXD3 122 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 Q6ZTC4 211 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 THAP8Q8NA92 274 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 NEU1Q99519 415 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 XCL2Q9UBD3 114 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 V9GYH0 126 aa10.36□□□□□ -0.75
SNRNP40-203ENST00000463988 SFT2D2O95562 160 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 S100A5P33763 92 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 LYZP61626 148 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 RPP30P78346 268 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 PRR20EP86478 221 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 PRR20CP86479 221 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 PRR20DP86480 221 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 PRR20BP86481 221 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 PRR20AP86496 221 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 ZNF79Q15937 498 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 SPATA31B1PQ5VZV4 182 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 RNF126Q9BV68 326 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 WDR12Q9GZL7 423 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 SAV1Q9H4B6 383 aaPredicted RBP10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 SLC45A2Q9UMX9 530 aa10.35□□□□□ -0.75
SNRNP40-203ENST00000463988 IGKV1OR2-108A0A075B7D4 117 aa10.34□□□□□ -0.75
SNRNP40-203ENST00000463988 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
SNRNP40-203ENST00000463988 SOCS3O14543 225 aa10.34□□□□□ -0.75
SNRNP40-203ENST00000463988 IAPPP10997 89 aa10.34□□□□□ -0.75
SNRNP40-203ENST00000463988 UBE2MP61081 183 aaKnown RBP10.34□□□□□ -0.75
SNRNP40-203ENST00000463988 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
SNRNP40-203ENST00000463988 GGNBP1Q5YKI7 109 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms